RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MFSD6LQ8IWD5 586 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 RIN3Q8TB24 985 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 PPM1EQ8WY54 764 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 C20orf27Q9GZN8 174 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 KCNK13Q9HB14 408 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 CDH22Q9UJ99 828 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 MTCH2Q9Y6C9 303 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 A0A1B0GVM2 712 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 ILVBLA1L0T0 632 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 HEATR9A2RTY3 570 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 TCAF2A6NFQ2 919 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 MPOP05164 745 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 C2P06681 752 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 FGF3P11487 239 aaPredicted RBP21.11■□□□□ 0.97
YBX3-202ENST00000279550 FSHRP23945 695 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 SLC1A2P43004 574 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 NCALDP61601 193 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 CCDC15Q0P6D6 951 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 MBLAC2Q68D91 279 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 CXorf57Q6NSI4 855 aaKnown RBP21.11■□□□□ 0.97
YBX3-202ENST00000279550 NLRP9Q7RTR0 991 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 TRIM55Q9BYV6 548 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 UBA2Q9UBT2 640 aaPredicted RBP21.11■□□□□ 0.97
YBX3-202ENST00000279550 KCTD3Q9Y597 815 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 NUMBLQ9Y6R0 609 aa21.11■□□□□ 0.97
YBX3-202ENST00000279550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.1■□□□□ 0.97
YBX3-202ENST00000279550 SNNO75324 88 aaPredicted RBP21.1■□□□□ 0.97
YBX3-202ENST00000279550 DNAJC8O75937 253 aaPredicted RBP21.1■□□□□ 0.97
YBX3-202ENST00000279550 KCNA4P22459 653 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 ZNF177Q13360 481 aaPredicted RBP21.1■□□□□ 0.97
YBX3-202ENST00000279550 ZNF77Q15935 545 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 ATG16L1Q676U5 607 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 ALG1LQ6GMV1 187 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 SLC41A1Q8IVJ1 513 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 NPAS3Q8IXF0 933 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 CPXM2Q8N436 756 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 RAB3IL1Q8TBN0 382 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 ZNF398Q8TD17 642 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 C7orf26Q96N11 449 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 MGME1Q9BQP7 344 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 ACE2Q9BYF1 805 aaPredicted RBP21.1■□□□□ 0.97
YBX3-202ENST00000279550 ECT2Q9H8V3 914 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 CLEC1BQ9P126 229 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 TBC1D30Q9Y2I9 924 aa21.1■□□□□ 0.97
YBX3-202ENST00000279550 CCL22O00626 93 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 AURKAO14965 403 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 TGDSO95455 350 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 TCF3P15923 654 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 USP4Q13107 963 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 THOC5Q13769 683 aaKnown RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 ADGRE1Q14246 886 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 CTC1Q2NKJ3 1217 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 RNF219Q5W0B1 726 aaPredicted RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 ZNF470Q6ECI4 717 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 CNPY4Q8N129 248 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 C2CD4AQ8NCU7 369 aaPredicted RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 OR13J1Q8NGT2 312 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 FEM1CQ96JP0 617 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 A0A0G2JND7 137 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 TYW5A2RUC4 315 aaKnown RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 MROH6A6NGR9 719 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 PHGDHO43175 533 aaKnown RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 TBX10O75333 385 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 DLDP09622 509 aaKnown RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 PAMP19021 973 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 POU3F3P20264 500 aaPredicted RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 SAT1P21673 171 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 ARSDP51689 593 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 CDK18Q07002 472 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 DLX2Q07687 328 aaPredicted RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 STX3Q13277 289 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 GALNT3Q14435 633 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 CYTH1Q15438 398 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 DBN1Q16643 649 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 NEPROQ6NW34 567 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 GET4Q7L5D6 327 aaPredicted RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 C10orf107Q8IVU9 208 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 PNPLA1Q8N8W4 532 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 TDRD5Q8NAT2 981 aaKnown RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 HJURPQ8NCD3 748 aaPredicted RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 FGF13Q92913 245 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 ERP27Q96DN0 273 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 TMA16Q96EY4 203 aaKnown RBP21.09■□□□□ 0.97
YBX3-202ENST00000279550 TMEM120AQ9BXJ8 343 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 NOD2Q9HC29 1040 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 SEPT3Q9UH03 358 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 FBXO5Q9UKT4 447 aa21.09■□□□□ 0.97
YBX3-202ENST00000279550 PRRC2BQ5JSZ5 2229 aaKnown RBP21.08■□□□□ 0.97
YBX3-202ENST00000279550 ITM2AO43736 263 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 TBL1XO60907 577 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 WEE1P30291 646 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 USP10Q14694 798 aaKnown RBP21.08■□□□□ 0.97
YBX3-202ENST00000279550 ZNF789Q5FWF6 425 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 FSCBQ5H9T9 825 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 ARMC3Q5W041 872 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 SETD3Q86TU7 594 aaPredicted RBP21.08■□□□□ 0.97
YBX3-202ENST00000279550 RNF135Q8IUD6 432 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 SPNS2Q8IVW8 549 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 GBP7Q8N8V2 638 aaPredicted RBP21.08■□□□□ 0.97
YBX3-202ENST00000279550 EXOC2Q96KP1 924 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms