RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
MRPL49-201ENST00000279242 DQX1Q8TE96 717 aaKnown RBP16.04■□□□□ 0.16
MRPL49-201ENST00000279242 ZC3H15Q8WU90 426 aaKnown RBP16.04■□□□□ 0.16
MRPL49-201ENST00000279242 EDEM1Q92611 657 aa16.04■□□□□ 0.16
MRPL49-201ENST00000279242 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
MRPL49-201ENST00000279242 VPS45Q9NRW7 570 aa16.04■□□□□ 0.16
MRPL49-201ENST00000279242 TRAF6Q9Y4K3 522 aa16.04■□□□□ 0.16
MRPL49-201ENST00000279242 CEPT1Q9Y6K0 416 aa16.04■□□□□ 0.16
MRPL49-201ENST00000279242 AQP12BA6NM10 295 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 H3BNH8 94 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 HAS3O00219 553 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
MRPL49-201ENST00000279242 C7P10643 843 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 CDK9P50750 372 aaKnown RBP16.03■□□□□ 0.16
MRPL49-201ENST00000279242 CSHL1Q14406 222 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 ZNF460Q14592 562 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
MRPL49-201ENST00000279242 DHFR2Q86XF0 187 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 EGFL6Q8IUX8 553 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 AQP12AQ8IXF9 295 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 PCDH20Q8N6Y1 951 aaKnown RBP16.03■□□□□ 0.16
MRPL49-201ENST00000279242 TRIML2Q8N7C3 387 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 HMGCLL1Q8TB92 370 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 USP33Q8TEY7 942 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 BIRC8Q96P09 236 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 CHST12Q9NRB3 414 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 RSL24D1Q9UHA3 163 aaKnown RBP16.03■□□□□ 0.16
MRPL49-201ENST00000279242 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
MRPL49-201ENST00000279242 C7orf72A4D263 438 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 PRORSD1PA6NEY8 169 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 ZNF701M0R085 212 aaPredicted RBP16.02■□□□□ 0.16
MRPL49-201ENST00000279242 IRAK2O43187 625 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 SLC7A4O43246 635 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 BMP10O95393 424 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 HNRNPLP14866 589 aaKnown RBP eCLIP16.02■□□□□ 0.16
MRPL49-201ENST00000279242 TCN1P20061 433 aaPredicted RBP16.02■□□□□ 0.16
MRPL49-201ENST00000279242 MAP7D1Q3KQU3 841 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 LDLRAD1Q5T700 205 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 INTS11Q5TA45 600 aaKnown RBP16.02■□□□□ 0.16
MRPL49-201ENST00000279242 KRT80Q6KB66 452 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 PAOXQ6QHF9 649 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 LARP4Q71RC2 724 aaKnown RBP eCLIP16.02■□□□□ 0.16
MRPL49-201ENST00000279242 MFSD2AQ8NA29 543 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 OR2T34Q8NGX1 318 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 OR2T3Q8NH03 318 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 MRGPRX2Q96LB1 330 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 CCT7Q99832 543 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 ACBD6Q9BR61 282 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 SLC25A51Q9H1U9 297 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 ACSS2Q9NR19 701 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 ABCC13Q9NSE7 274 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 RBM22Q9NW64 420 aaKnown RBP eCLIP16.02■□□□□ 0.16
MRPL49-201ENST00000279242 OSER1Q9NX31 292 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 PCDHGB4Q9UN71 923 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 NDUFAF1Q9Y375 327 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 RNF11Q9Y3C5 154 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 PCDHGB5Q9Y5G0 923 aa16.02■□□□□ 0.16
MRPL49-201ENST00000279242 WASH4PA8MWX3 477 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 HNRNPRO43390 633 aaKnown RBP16.02■□□□□ 0.15
MRPL49-201ENST00000279242 THP07101 528 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 FGF4P08620 206 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 CCR1P32246 355 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 C1QTNF8P60827 252 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 BNIP2Q12982 314 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 KCTD21Q4G0X4 260 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 COQ5Q5HYK3 327 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 FAM171BQ6P995 826 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 MOB2Q70IA6 237 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 GPR142Q7Z601 462 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 LRTOMTQ8WZ04 291 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.02■□□□□ 0.15
MRPL49-201ENST00000279242 SLCO4A1Q96BD0 722 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 PPP1R14BQ96C90 147 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 RMND5BQ96G75 393 aaPredicted RBP16.02■□□□□ 0.15
MRPL49-201ENST00000279242 MUC13Q9H3R2 512 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 CLK4Q9HAZ1 481 aaKnown RBP16.02■□□□□ 0.15
MRPL49-201ENST00000279242 ATP13A1Q9HD20 1204 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 CCDC167Q9P0B6 97 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 SNX13Q9Y5W8 968 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 SNX10Q9Y5X0 201 aa16.02■□□□□ 0.15
MRPL49-201ENST00000279242 CCDC78A2IDD5 438 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 DDNO94850 711 aaPredicted RBP16.01■□□□□ 0.15
MRPL49-201ENST00000279242 CCDC166P0CW27 439 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 PSEN2P49810 448 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 USP46P62068 366 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 HPCAP84074 193 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 DCTN2Q13561 401 aaKnown RBP16.01■□□□□ 0.15
MRPL49-201ENST00000279242 GK3PQ14409 553 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 MAPRE1Q15691 268 aaKnown RBP16.01■□□□□ 0.15
MRPL49-201ENST00000279242 C6orf10Q5SRN2 563 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 CAMK1DQ8IU85 385 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 CLYBLQ8N0X4 340 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 FAM156AQ8NDB6 213 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 TSPEARQ8WU66 669 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 PEX13Q92968 403 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 TCF12Q99081 682 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 TMEM79Q9BSE2 394 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 KATNAL1Q9BW62 490 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 SLC39A8Q9C0K1 460 aa16.01■□□□□ 0.15
MRPL49-201ENST00000279242 GSTO2Q9H4Y5 243 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms