RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CAMKK1Q8N5S9 505 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 LEMD2Q8NC56 503 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 ADCY4Q8NFM4 1077 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 FAM124BQ9H5Z6 455 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-201ENST00000273317 SEMA4BQ9NPR2 832 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-201ENST00000273317 SLC22A3O75751 556 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 SLC6A2P23975 617 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 CASP5P51878 434 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 GCNT7Q6ZNI0 430 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 PHC3Q8NDX5 983 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 FBXO30Q8TB52 745 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 TBC1D10AQ9BXI6 508 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 SNX7Q9UNH6 387 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 LMO7Q8WWI1 1683 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 LACTBL1A8MY62 500 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 STX16-NPEPL1H3BU86 382 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 STX16O14662 325 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 PGRMC2O15173 223 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 CD86P42081 329 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 TUBA4AP68366 448 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 PHF13Q86YI8 300 aaPredicted RBP8.02□□□□□ -1.13
LIMD1-201ENST00000273317 MINDY2Q8NBR6 621 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 TBCDQ9BTW9 1192 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 CDH19Q9H159 772 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 PFDN2Q9UHV9 154 aa8.02□□□□□ -1.13
LIMD1-201ENST00000273317 FNDC3BQ53EP0 1204 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 FAM71AQ8IYT1 594 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 RTFDC1Q9BY42 306 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 MCUBQ9NWR8 336 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 KLQ9UEF7 1012 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 USP17L7P0C7H9 530 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 TPH1P17752 444 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 AMPD1P23109 780 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 GPR1P46091 355 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 BBS12Q6ZW61 710 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 DNAJB7Q7Z6W7 309 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 POC5Q8NA72 575 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 EBNA1BP2Q99848 306 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 HOPXQ9BPY8 73 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CIPCQ9C0C6 399 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SENP6Q9GZR1 1112 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 DHX33Q9H6R0 707 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 IFT80Q9P2H3 777 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 TRPS1Q9UHF7 1281 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SCAF8Q9UPN6 1271 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 TRAV19A0A0A6YYK7 116 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 LOC110117498-PIK3R3F6TDL0 507 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 AZIN1O14977 448 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CCDC166P0CW27 439 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 HGFP14210 728 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ERCC2P18074 760 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 HTR7P34969 479 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 NOS2P35228 1153 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 MFSD10Q14728 455 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 RNF44Q7L0R7 432 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SLC41A1Q8IVJ1 513 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ZC3H7AQ8IWR0 971 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 BAP1Q92560 729 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 EDEM1Q92611 657 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 PTGFRNQ9P2B2 879 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 DNMT3LQ9UJW3 386 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CHP2O43745 196 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 UGT2B17O75795 530 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 USP46P62068 366 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 MFSD5Q6N075 450 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 RAB43Q86YS6 212 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 PORCNQ9H237 461 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 EURLQ9NYK6 297 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 C3P01024 1663 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CCNE2O96020 404 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CCNB1P14635 433 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 MADCAM1Q13477 382 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 OR4A15Q8NGL6 344 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SSU72Q9NP77 194 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ADAMTS13Q76LX8 1427 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CASTOR2A6NHX0 329 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ACSL4O60488 711 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 MYBL2P10244 700 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ASMTP46597 345 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SCUBE3Q8IX30 993 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 NECTIN3Q9NQS3 549 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 TRMT13Q9NUP7 481 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 H3BNH8 94 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 BCKDKO14874 412 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SLC22A2O15244 555 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 IL1R1P14778 569 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 FKBP1AP62942 108 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 PTGR2Q8N8N7 351 aaPredicted RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 PNPT1Q8TCS8 783 aaKnown RBP8.01□□□□□ -1.13
LIMD1-201ENST00000273317 CIDEBQ9UHD4 219 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ZNF221Q9UK13 617 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 PSMD13Q9UNM6 376 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 AMHP03971 560 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 NUMBP49757 651 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 TAS2R41P59536 307 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 SLC9A9Q8IVB4 645 aa8.01□□□□□ -1.13
LIMD1-201ENST00000273317 ACE2Q9BYF1 805 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms