RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 HSPA1AP0DMV8 641 aaKnown RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 HSPA1BP0DMV9 641 aaKnown RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 PSEN2P49810 448 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 ITKQ08881 620 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 PABPC1LQ4VXU2 614 aaKnown RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 FBXO48Q5FWF7 155 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 GPR158Q5T848 1215 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 IQSEC1Q6DN90 963 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 LRRTM3Q86VH5 581 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 CHERPQ8IWX8 916 aaKnown RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 TSGA13Q96PP4 275 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 SGIP1Q9BQI5 828 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 NDUFA13Q9P0J0 144 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 KCTD3Q9Y597 815 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 ARHGEF37A1IGU5 675 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 F8W810 466 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 MRASO14807 208 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 TRIM24O15164 1050 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 SLC4A1P02730 911 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 SLC7A2P52569 658 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 WNT3AP56704 352 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 CDC42EP1Q00587 391 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 CACNB2Q08289 660 aaPredicted RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 IHHQ14623 411 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 FAM83EQ2M2I3 478 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 LRRC23Q53EV4 343 aaPredicted RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 C6orf10Q5SRN2 563 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 CHSY3Q70JA7 882 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 TFAP2DQ7Z6R9 452 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 RYBPQ8N488 228 aaPredicted RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 TMEM79Q9BSE2 394 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 CRYL1Q9Y2S2 319 aa22.28■■□□□ 1.16
CDR2-201ENST00000268383 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.28■■□□□ 1.16
CDR2-201ENST00000268383 HEATR9A2RTY3 570 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 GJB3O75712 270 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 SUPT7LO94864 414 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 LHX1P48742 406 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 COG7P83436 770 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 PTPRCAPQ14761 206 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 RANBP10Q6VN20 620 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 CASP10Q92851 521 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 RPL10LQ96L21 214 aaKnown RBP22.27■■□□□ 1.16
CDR2-201ENST00000268383 CCL15-CCL14A0A0B4J2E2 113 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 FAM149AA5PLN7 773 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 MATN3O15232 486 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 STRNO43815 780 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 CDKN2DP55273 166 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 CCL15Q16663 113 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 ZFRQ96KR1 1074 aaKnown RBP22.27■■□□□ 1.16
CDR2-201ENST00000268383 MEAF6Q9HAF1 191 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 PREBQ9HCU5 417 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 ATXN10Q9UBB4 475 aa22.27■■□□□ 1.16
CDR2-201ENST00000268383 MIA3Q5JRA6 1907 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 TPST1O60507 370 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 THP07101 528 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 ARSDP51689 593 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 PRAMEP78395 509 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 PFKPQ01813 784 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 RHDQ02161 417 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 POTEHQ6S545 545 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 OR52K2Q8NGK3 314 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 OR6P1Q8NGX9 317 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 CANT1Q8WVQ1 401 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 CCT7Q99832 543 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 FLRT1Q9NZU1 646 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 SUCOQ9UBS9 1254 aaKnown RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 DSEQ9UL01 958 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 CNOT6Q9ULM6 557 aaKnown RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 TRAF6Q9Y4K3 522 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 A0A087X1B8 175 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 POMCP01189 267 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 CAPNS1P04632 268 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 SNRPB2P08579 225 aaKnown RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 ALDOCP09972 364 aaKnown RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 GRIA3P42263 894 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 CRYBB1P53674 252 aaPredicted RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 GEMP55040 296 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 POU4F1Q01851 419 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 STX5Q13190 355 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 GRB14Q14449 540 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 RETREG3Q86VR2 466 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 TMEM126BQ8IUX1 230 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 TSPAN14Q8NG11 270 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 NT5MQ9NPB1 228 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 SPAG4Q9NPE6 437 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 MARCH4Q9P2E8 410 aaPredicted RBP22.26■■□□□ 1.15
CDR2-201ENST00000268383 EGFL7Q9UHF1 273 aa22.26■■□□□ 1.15
CDR2-201ENST00000268383 SAC3D1A6NKF1 404 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 CHRM3P20309 590 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 SQLEQ14534 574 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 ZNF467Q7Z7K2 595 aaPredicted RBP22.25■■□□□ 1.15
CDR2-201ENST00000268383 FUNDC1Q8IVP5 155 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 NUP93Q8N1F7 819 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 BRI3BPQ8WY22 251 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 GSTO2Q9H4Y5 243 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 CEPT1Q9Y6K0 416 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 SOCS2O14508 198 aa22.25■■□□□ 1.15
CDR2-201ENST00000268383 PSMD3O43242 534 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms