RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SPO11Q9Y5K1 396 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 C2orf16Q68DN1 1984 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 A0A096LPK6 155 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SNX3O60493 162 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 MPOP05164 745 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 TCF3P15923 654 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SAT1P21673 171 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 BGNP21810 368 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 HADHAP40939 763 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 IRX4P78413 519 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 ACVR1Q04771 509 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SLC12A1Q13621 1099 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PTPRCAPQ14761 206 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 FUT11Q495W5 492 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 RALGPS1Q5JS13 557 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 C16orf46Q6P387 395 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 KYAT3Q6YP21 454 aaKnown RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 GLT6D1Q7Z4J2 308 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 PTAR1Q7Z6K3 402 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 LMLNQ96KR4 655 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SMIM14Q96QK8 99 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 MECRQ9BV79 373 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 LINC00597Q9H2U6 94 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 MFSD1Q9H3U5 465 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 SPHK2Q9NRA0 654 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 FBXO6Q9NRD1 293 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-201ENST00000266589 EMCNQ9ULC0 261 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 WNT6Q9Y6F9 365 aa11.63□□□□□ -0.55
SCAF11-201ENST00000266589 FAM95CA0A1B0GW59 222 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 OR51F1A6NGY5 319 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 AURKAO14965 403 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 EDF1O60869 148 aaKnown RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 CRTAMO95727 393 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 TYRP14679 529 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 CTSOP43234 321 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 CD151P48509 253 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 AP1S1P61966 158 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 USP10Q14694 798 aaKnown RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 INSCQ1MX18 579 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 ASTLQ6HA08 431 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 KIAA0408Q6ZU52 694 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 SPATA21Q7Z572 469 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 METTL3Q86U44 580 aaKnown RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 SPATS2Q86XZ4 545 aaKnown RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 SLC41A1Q8IVJ1 513 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 CCDC63Q8NA47 563 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 VN1R2Q8NFZ6 395 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 OR13C4Q8NGS5 318 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 OR6K2Q8NGY2 324 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 STYXQ8WUJ0 223 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 RPL10LQ96L21 214 aaKnown RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 TBATAQ96M53 351 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 LMAN2LQ9H0V9 348 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 SUDS3Q9H7L9 328 aaPredicted RBP11.62□□□□□ -0.55
SCAF11-201ENST00000266589 SFXN1Q9H9B4 322 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 MSRAQ9UJ68 235 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 GGA2Q9UJY4 613 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 RIMKLBQ9ULI2 386 aa11.62□□□□□ -0.55
SCAF11-201ENST00000266589 TRANK1O15050 2925 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 EPOPA6NHQ4 379 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 RPP40O75818 363 aaKnown RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 HAUS5O94927 633 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 GOT2P00505 430 aaKnown RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 SLC4A1P02730 911 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 C2P06681 752 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 SLC8A1P32418 973 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 STK19P49842 368 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 ZNF140P52738 457 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 IRF9Q00978 393 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 TAF1AQ15573 450 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 LY6G5CQ5SRR4 150 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 RAPH1Q70E73 1250 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CILP2Q8IUL8 1156 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 MFSD6LQ8IWD5 586 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 GPATCH11Q8N954 259 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 MDGA1Q8NFP4 955 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 GRAMD1AQ96CP6 724 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 OTUB2Q96DC9 234 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 ELMO2Q96JJ3 720 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 TNKS2Q9H2K2 1166 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 EVLQ9UI08 416 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 USP15Q9Y4E8 981 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CCDC162PA2VCL2 907 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 FZD6O60353 706 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 PLIN3O60664 434 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 IGSF6O95976 241 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 BPGMP07738 259 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 GSTA1P08263 222 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 PABPC1P11940 636 aaKnown RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 SRCP12931 536 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 LEPRP48357 1165 aaKnown RBP11.61□□□□□ -0.55
SCAF11-201ENST00000266589 CSRP3P50461 194 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 PGGT1BP53609 377 aa11.61□□□□□ -0.55
SCAF11-201ENST00000266589 SLC20A2Q08357 652 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms