RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CRYBG2Q8N1P7 616 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 RNF145Q96MT1 663 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 KRT84Q9NSB2 600 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 SNX6Q9UNH7 406 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 UGT2B4P06133 528 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 GSTM1P09488 218 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 LYPLAL1Q5VWZ2 237 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CLEC20AQ6ZU45 233 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 RBFAQ8N0V3 343 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 OR6Y1Q8NGX8 325 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 SPATA22Q8NHS9 363 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 PCYT2Q99447 389 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CHRAC1Q9NRG0 131 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 ZMYND8Q9ULU4 1186 aaPredicted RBP15.48■□□□□ 0.07
TIMP3-201ENST00000266085 AP4S1Q9Y587 144 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CPQQ9Y646 472 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 A0A1B0GVM2 712 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 TCAF2A6NFQ2 919 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 ANKDD1BA6NHY2 528 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 EDF1O60869 148 aaKnown RBP15.48■□□□□ 0.07
TIMP3-201ENST00000266085 FSBPO95073 299 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CFHP08603 1231 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CCNCP24863 283 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 NUP107P57740 925 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 OR4K2Q8NGD2 314 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CAB39LQ9H9S4 337 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 EVLQ9UI08 416 aaPredicted RBP15.48■□□□□ 0.07
TIMP3-201ENST00000266085 AP2A1O95782 977 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 C8AP07357 584 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CDYL2Q8N8U2 506 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 ANKRD27Q96NW4 1050 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 SDCBP2Q9H190 292 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 ENO4A6NNW6 628 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 MAGEC1O60732 1142 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 RGS20O76081 388 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 FTH1P02794 183 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 DSC2Q02487 901 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 SULT2A1Q06520 285 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CA9Q16790 459 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 RNASEH2BQ5TBB1 312 aaKnown RBP15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CNSTQ6PJW8 725 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 CIR1Q86X95 450 aaPredicted RBP15.48■□□□□ 0.07
TIMP3-201ENST00000266085 ZNF567Q8N184 647 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 MAGED4Q96JG8 741 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 IL1RAPL1Q9NZN1 696 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 FBXW11Q9UKB1 542 aa15.48■□□□□ 0.07
TIMP3-201ENST00000266085 NDST3O95803 873 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 SYPL2Q5VXT5 272 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 RGL4Q8IZJ4 473 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 C10orf53Q8N6V4 93 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 UBE2E3Q969T4 207 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 MYO19Q96H55 970 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 MECRQ9BV79 373 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 UGT2B28Q9BY64 529 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 MAN1C1Q9NR34 630 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 SLC17A7Q9P2U7 560 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 GABRQQ9UN88 632 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 BMP10O95393 424 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 CLPTM1O96005 669 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 FASTKD3Q14CZ7 662 aaKnown RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 TRIP4Q15650 581 aaPredicted RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 FAM46CQ5VWP2 391 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 ANKRD22Q5VYY1 191 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 DRICH1Q6PGQ1 229 aaPredicted RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 BBS4Q96RK4 519 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 MYOCQ99972 504 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 BRD9Q9H8M2 597 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 HBS1LQ9Y450 684 aaKnown RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 TULP2O00295 520 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 PRMT5O14744 637 aaPredicted RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 WDR47O94967 919 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 SLC25A14O95258 325 aaPredicted RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 CTSEP14091 401 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 HNRNPLP14866 589 aaKnown RBP eCLIP15.47■□□□□ 0.077e-8■■■□□ 15.9
TIMP3-201ENST00000266085 OASLQ15646 514 aaKnown RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 LDLRAD1Q5T700 205 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 ATAD3BQ5T9A4 648 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 C10orf107Q8IVU9 208 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 MTFMTQ96DP5 389 aaKnown RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 QRFPRQ96P65 431 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 TCF25Q9BQ70 676 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 TRMOQ9BU70 441 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 NDEL1Q9GZM8 345 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 RAI2Q9Y5P3 530 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 ATP6AP2A0A1C7CYW4 349 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 FFAR3O14843 346 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 GPR42O15529 346 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 ATP6AP2O75787 350 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 SNRPB2P08579 225 aaKnown RBP15.47■□□□□ 0.07
TIMP3-201ENST00000266085 HGFP14210 728 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 HPCAL1P37235 193 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 GPRIN3Q6ZVF9 776 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 GPR141Q7Z602 305 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 STK32CQ86UX6 486 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 TMCO5AQ8N6Q1 288 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 KREMEN2Q8NCW0 462 aa15.47■□□□□ 0.07
TIMP3-201ENST00000266085 ACTRT2Q8TDY3 377 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms