RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 AGO1Q9UL18 857 aaKnown RBP16.98■□□□□ 0.31
CHKA-201ENST00000265689 KIAA1671Q9BY89 1806 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 B2RBV5 119 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 DLX3O60479 287 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 ATP5BP06576 529 aaKnown RBP16.98■□□□□ 0.31
CHKA-201ENST00000265689 CA8P35219 290 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 LEPRP48357 1165 aaKnown RBP16.98■□□□□ 0.31
CHKA-201ENST00000265689 NAGLUP54802 743 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 PRAMEP78395 509 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 BTG3Q14201 252 aaPredicted RBP16.98■□□□□ 0.31
CHKA-201ENST00000265689 LIPMQ5VYY2 423 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 CILP2Q8IUL8 1156 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 SLC39A11Q8N1S5 342 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 TEX9Q8N6V9 391 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 HEXDCQ8WVB3 486 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 EXOC2Q96KP1 924 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 TBATAQ96M53 351 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 ZNF558Q96NG5 402 aa16.98■□□□□ 0.31
CHKA-201ENST00000265689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.98■□□□□ 0.313e-8■■■■■ 49.5
CHKA-201ENST00000265689 SLC7A4O43246 635 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 MPSTP25325 297 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 OXCT1P55809 520 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 TWF1Q12792 350 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 ARMC3Q5W041 872 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 TPGS2Q68CL5 300 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 LCA5Q86VQ0 697 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 TDRD5Q8NAT2 981 aaKnown RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 SGF29Q96ES7 293 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 DNAJC1Q96KC8 554 aaKnown RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 KLF16Q9BXK1 252 aaPredicted RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 MFSD1Q9H3U5 465 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 DENND2DQ9H6A0 471 aaPredicted RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 COG4Q9H9E3 785 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHKA-201ENST00000265689 UBA2Q9UBT2 640 aaPredicted RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 TAGLN3Q9UI15 199 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 LCHNA4D1U4 455 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 KDELR3O43731 214 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 H2AFYO75367 372 aaKnown RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 CLDN11O75508 207 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 RHOCP08134 193 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 SERPINF2P08697 491 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 HLA-DPA1P20036 260 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 ZNF177Q13360 481 aaPredicted RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 CSHL1Q14406 222 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 MAPK15Q8TD08 544 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 ZNF689Q96CS4 500 aaPredicted RBP16.97■□□□□ 0.31
CHKA-201ENST00000265689 CYP2S1Q96SQ9 504 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 MGME1Q9BQP7 344 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 SHCBP1LQ9BZQ2 653 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 IGSF5Q9NSI5 407 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 SEPT3Q9UH03 358 aa16.97■□□□□ 0.31
CHKA-201ENST00000265689 A0A087X1B8 175 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 PRRG1O14668 218 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 WFS1O76024 890 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 S1PR4O95977 384 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 FGF1P05230 155 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 CCND1P24385 295 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 DNAJB1P25685 340 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 CLCN5P51795 746 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 SLC9B1Q4ZJI4 515 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 ADGRF1Q5T601 910 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 C7orf61Q8IZ16 206 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 OR13C4Q8NGS5 318 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 TTC8Q8TAM2 541 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 MCUR1Q96AQ8 359 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 CINPQ9BW66 212 aaPredicted RBP16.96■□□□□ 0.31
CHKA-201ENST00000265689 DRC3Q9H069 523 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 MAN1C1Q9NR34 630 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 CHD5Q8TDI0 1954 aa16.96■□□□□ 0.31
CHKA-201ENST00000265689 CBX4O00257 560 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 SCNN1BP51168 640 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 ARL13AQ5H913 290 aaPredicted RBP16.96■□□□□ 0.3
CHKA-201ENST00000265689 CFAP157Q5JU67 520 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 HECTD2Q5U5R9 776 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 ALG1LQ6GMV1 187 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 DNAJB7Q7Z6W7 309 aaPredicted RBP16.96■□□□□ 0.3
CHKA-201ENST00000265689 RBM15BQ8NDT2 890 aaKnown RBP16.96■□□□□ 0.3
CHKA-201ENST00000265689 PSKH2Q96QS6 385 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 TRIB3Q96RU7 358 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 SLC22A12Q96S37 553 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 YME1L1Q96TA2 773 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 ILKAPQ9H0C8 392 aaPredicted RBP16.96■□□□□ 0.3
CHKA-201ENST00000265689 FAM96AQ9H5X1 160 aa16.96■□□□□ 0.3
CHKA-201ENST00000265689 NKX1-2Q9UD57 310 aaPredicted RBP16.96■□□□□ 0.3
CHKA-201ENST00000265689 MTF2Q9Y483 593 aaPredicted RBP16.96■□□□□ 0.3
CHKA-201ENST00000265689 VCANP13611 3396 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 SPECC1L-ADORA2AF8WAN1 911 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 PEX11AO75192 247 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 ENTPD5O75356 428 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 PIGNO95427 931 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 EPOP01588 193 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 VEPH1Q14D04 833 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 RNF219Q5W0B1 726 aaPredicted RBP16.95■□□□□ 0.3
CHKA-201ENST00000265689 EPGNQ6UW88 154 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 TMC7Q7Z402 723 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 TMEM150AQ86TG1 271 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 BBS5Q8N3I7 341 aa16.95■□□□□ 0.3
CHKA-201ENST00000265689 SH3RF2Q8TEC5 729 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms