RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 FADS3Q9Y5Q0 445 aa14.37□□□□□ -0.11
SSBP1-201ENST00000265304 PLXNA2O75051 1894 aa14.37□□□□□ -0.11
SSBP1-201ENST00000265304 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
SSBP1-201ENST00000265304 A0A0J9YYE9 177 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 H0Y858 1186 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 TP73O15350 636 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 TRBC1P01850 177 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 HLA-DPA1P20036 260 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 TPSB2P20231 275 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 PSMA3P25788 255 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 GRIA4P48058 902 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 DR1Q01658 176 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 CSTF1Q05048 431 aaKnown RBP14.36□□□□□ -0.11
SSBP1-201ENST00000265304 KCNJ11Q14654 390 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 AGERQ15109 404 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 TPSAB1Q15661 275 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 CDKN3Q16667 212 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 QPCTQ16769 361 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 TMEM52BQ4KMG9 183 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 USP39Q53GS9 565 aaKnown RBP14.36□□□□□ -0.11
SSBP1-201ENST00000265304 GSTA5Q7RTV2 222 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 PRUNE1Q86TP1 453 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 C11orf74Q86VG3 221 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 MCUQ8NE86 351 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 CADM4Q8NFZ8 388 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 KRT12Q99456 494 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 ADGRE3Q9BY15 652 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 LRRC40Q9H9A6 602 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 MAGEE1Q9HCI5 957 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 RAB6BQ9NRW1 208 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 NCKAP1Q9Y2A7 1128 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 PCDHGA2Q9Y5H1 932 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 WDR87Q6ZQQ6 2873 aa14.36□□□□□ -0.11
SSBP1-201ENST00000265304 CABIN1Q9Y6J0 2220 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 A0A1W2PP55 124 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CTAGE15A4D2H0 777 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 SMAPO00193 183 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 LATO43561 262 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 TSPAN6O43657 245 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 PMPCBO75439 489 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 FGF1P05230 155 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CTAGE8P0CG41 777 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ACADMP11310 421 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CD6P30203 668 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 MMP12P39900 470 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ABL2P42684 1182 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 FNTBP49356 437 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ADPRHP54922 357 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ELP6Q0PNE2 266 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 SLC1A5Q15758 541 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 GLE1Q53GS7 698 aaKnown RBP14.35□□□□□ -0.11
SSBP1-201ENST00000265304 DUPD1Q68J44 220 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 FBXL19Q6PCT2 694 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 TSSK4Q6SA08 328 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 KIAA1324Q6UXG2 1013 aaKnown RBP14.35□□□□□ -0.11
SSBP1-201ENST00000265304 DPPA4Q7L190 304 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 LINC00523Q86TU6 105 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 TTC7BQ86TV6 843 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CTAGE6Q86UF2 777 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CTAGE4Q8IX94 777 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 KLHL7Q8IXQ5 586 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ZC3H10Q96K80 434 aaKnown RBP14.35□□□□□ -0.11
SSBP1-201ENST00000265304 OMDQ99983 421 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ERP44Q9BS26 406 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 PREBQ9HCU5 417 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CD93Q9NPY3 652 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 DYRK4Q9NR20 520 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 BCCIPQ9P287 314 aaKnown RBP eCLIP14.35□□□□□ -0.11
SSBP1-201ENST00000265304 MBD1Q9UIS9 605 aaPredicted RBP14.35□□□□□ -0.11
SSBP1-201ENST00000265304 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 TTLL3Q9Y4R7 772 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 MYLKQ15746 1914 aa14.35□□□□□ -0.11
SSBP1-201ENST00000265304 ZNF106Q9H2Y7 1883 aaKnown RBP14.34□□□□□ -0.11
SSBP1-201ENST00000265304 TTI1O43156 1089 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 RAD51CO43502 376 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
SSBP1-201ENST00000265304 CPP00450 1065 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 NFKBIAP25963 317 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 ACSL1P33121 698 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 MAGEA3P43357 314 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 CCR5P51681 352 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 RALGDSQ12967 914 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 GPS1Q13098 491 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 TMEM259Q4ZIN3 620 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 SIRPB2Q5JXA9 342 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 RNASEH2BQ5TBB1 312 aaKnown RBP14.34□□□□□ -0.11
SSBP1-201ENST00000265304 NAPEPLDQ6IQ20 393 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.34□□□□□ -0.11
SSBP1-201ENST00000265304 SLC36A4Q6YBV0 504 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 HOOK3Q86VS8 718 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 NLRP8Q86W28 1048 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 TRIM69Q86WT6 500 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 NDUFAF2Q8N183 169 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 PGBD3Q8N328 593 aa14.34□□□□□ -0.11
SSBP1-201ENST00000265304 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
SSBP1-201ENST00000265304 NAT8LQ8N9F0 302 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms