RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 CDH23Q9H251 3354 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 KIF26AQ9ULI4 1882 aaPredicted RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 MYO9BQ13459 2157 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 A0A1W2PPM1 405 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 HTRA2O43464 458 aaPredicted RBP13.08□□□□□ -0.31
VAMP7-201ENST00000262640 SIN3BO75182 1162 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 ECI2O75521 394 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 CREB1P16220 341 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 SERPINA4P29622 427 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 MDH1P40925 334 aaKnown RBP13.08□□□□□ -0.31
VAMP7-201ENST00000262640 GRIA4P48058 902 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 CSE1LP55060 971 aaKnown RBP13.08□□□□□ -0.31
VAMP7-201ENST00000262640 ACVR1Q04771 509 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 DNAJC3Q13217 504 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 RUNX3Q13761 415 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.31
VAMP7-201ENST00000262640 GRM3Q14832 879 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 SMAD1Q15797 465 aaKnown RBP13.08□□□□□ -0.31
VAMP7-201ENST00000262640 QPCTQ16769 361 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 CAMK1DQ8IU85 385 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 SMRP1Q8NCR6 262 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.31
VAMP7-201ENST00000262640 OR6K2Q8NGY2 324 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 MRGPRX3Q96LB0 322 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 KXD1Q9BQD3 176 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 PLA2G2FQ9BZM2 168 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 CIPCQ9C0C6 399 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 KCNK9Q9NPC2 374 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 HACD3Q9P035 362 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 SLCO3A1Q9UIG8 710 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 PCDHB9Q9Y5E1 797 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 PSAT1Q9Y617 370 aa13.08□□□□□ -0.31
VAMP7-201ENST00000262640 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 TMEM120BA0PK00 339 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 PRPF4O43172 522 aaKnown RBP eCLIP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 SLC7A4O43246 635 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 POP4O95707 220 aaKnown RBP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 PRKCGP05129 697 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 DLDP09622 509 aaKnown RBP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 KRT4P19013 534 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 IGFBP4P22692 258 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 ARNTP27540 789 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 EPHB1P54762 984 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 RAD51Q06609 339 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 GRM2Q14416 872 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 PARM1Q6UWI2 310 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 TIFABQ6ZNK6 161 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 MTSS1LQ765P7 747 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 OR13J1Q8NGT2 312 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 CALML6Q8TD86 181 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 STYXQ8WUJ0 223 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 AGAP2Q99490 1192 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 CPEB1Q9BZB8 566 aaKnown RBP13.08□□□□□ -0.32
VAMP7-201ENST00000262640 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 SPO11Q9Y5K1 396 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 ARL5AQ9Y689 179 aa13.08□□□□□ -0.32
VAMP7-201ENST00000262640 PIGNO95427 931 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 PIRTP0C851 137 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 CHN1P15882 459 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 SPRP35270 261 aaPredicted RBP13.07□□□□□ -0.32
VAMP7-201ENST00000262640 SLC18A1P54219 525 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 UGP2Q16851 508 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 GLT6D1Q7Z4J2 308 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 MDM1Q8TC05 714 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 CYB5D2Q8WUJ1 264 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 RBBP8Q99708 897 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
VAMP7-201ENST00000262640 FAM47DPA6NHR8 397 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 C2orf81A6NN90 581 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 TIMM44O43615 452 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 RECQLP46063 649 aaPredicted RBP13.07□□□□□ -0.32
VAMP7-201ENST00000262640 SLC6A11P48066 632 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 CCNHP51946 323 aaPredicted RBP13.07□□□□□ -0.32
VAMP7-201ENST00000262640 PDE1BQ01064 536 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 BMPR2Q13873 1038 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 EIF4HQ15056 248 aaKnown RBP13.07□□□□□ -0.32
VAMP7-201ENST00000262640 MROH9Q5TGP6 573 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 NEPROQ6NW34 567 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 Q6ZVU0 165 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 LMNTD2Q8IXW0 634 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 PIH1D2Q8WWB5 315 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 FGF14Q92915 247 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 SERAC1Q96JX3 654 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 SRPK1Q96SB4 655 aaKnown RBP13.07□□□□□ -0.32
VAMP7-201ENST00000262640 MFSD1Q9H3U5 465 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 ELOVL2Q9NXB9 296 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 NKIRAS1Q9NYS0 192 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 EPS15L1Q9UBC2 864 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 CD207Q9UJ71 328 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 KCTD3Q9Y597 815 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 MYLKQ15746 1914 aa13.07□□□□□ -0.32
VAMP7-201ENST00000262640 HMX2A2RU54 273 aa13.06□□□□□ -0.32
VAMP7-201ENST00000262640 WASH3PC4AMC7 463 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms