RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 TBATAQ96M53 351 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 PDFQ9HBH1 243 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 LRRC42Q9Y546 428 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 INSL5Q9Y5Q6 135 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 G3V2L1 256 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 TBL1XO60907 577 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 PEX11AO75192 247 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 PTDSS1P48651 473 aaKnown RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 KPNA1P52294 538 aaPredicted RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 ZNF177Q13360 481 aaPredicted RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 MSLNQ13421 630 aaPredicted RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 C7orf26Q96N11 449 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 KLF16Q9BXK1 252 aaPredicted RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 COMMD8Q9NX08 183 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 CRYL1Q9Y2S2 319 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 PCDHGC4Q9Y5F7 938 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 HEATR9A2RTY3 570 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 AP3B1O00203 1094 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 ENTPD5O75356 428 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CALB2P22676 271 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 RABGAP1LQ5R372 815 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CENPLQ8N0S6 344 aaPredicted RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 SORT1Q99523 831 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 OLFM1Q99784 485 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CINPQ9BW66 212 aaPredicted RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 MRPL17Q9NRX2 175 aaKnown RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 THAP1Q9NVV9 213 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 UBA2Q9UBT2 640 aaPredicted RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 C5orf42Q9H799 3197 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 MPOP05164 745 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CNPP09543 421 aaKnown RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 TPBGLP0DKB5 382 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CDK18Q07002 472 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 UBAP2LQ14157 1087 aaKnown RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 RCN2Q14257 317 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 MUM1Q2TAK8 710 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 ADGRF1Q5T601 910 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CLEC14AQ86T13 490 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 OR6K2Q8NGY2 324 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 SKA1Q96BD8 255 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 SLC7A6OSQ96CW6 309 aaPredicted RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 RC3H2Q9HBD1 1191 aaKnown RBP13.66□□□□□ -0.22
VMP1-201ENST00000262291 FNIP2Q9P278 1114 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 CPQQ9Y646 472 aa13.66□□□□□ -0.22
VMP1-201ENST00000262291 NEMP2A6NFY4 417 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 C1RP00736 705 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 TIMP1P01033 207 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 SERPINE1P05121 402 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 CHRNGP07510 517 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 SBK3P0C264 359 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 PAMP19021 973 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 CD151P48509 253 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 EPHB3P54753 998 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 CDH4P55283 916 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 PRAMEP78395 509 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 RAB33AQ14088 237 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 FRG1Q14331 258 aaKnown RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 RPS27LQ71UM5 84 aaKnown RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 MAVSQ7Z434 540 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 PIM3Q86V86 326 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 C2CD4AQ8NCU7 369 aaPredicted RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 DNAJC9Q8WXX5 260 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 RMDN1Q96DB5 314 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 ACE2Q9BYF1 805 aaPredicted RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 SPO11Q9Y5K1 396 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 H0Y626 953 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 LDB2O43679 373 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 FGF18O76093 207 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 TGDSO95455 350 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 ENO1P06733 434 aaKnown RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 HDCP19113 662 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 GABRR2P28476 465 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 CSHL1Q14406 222 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 KIAA0930Q6ICG6 404 aaPredicted RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 TREML1Q86YW5 311 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 FSTL5Q8N475 847 aaPredicted RBP13.65□□□□□ -0.22
VMP1-201ENST00000262291 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 ADAMTS19Q8TE59 1207 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 ISL2Q96A47 359 aa13.65□□□□□ -0.22
VMP1-201ENST00000262291 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 560.1 ms