RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PPP1R21Q6ZMI0 780 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 TRIB3Q96RU7 358 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 HEPHQ9BQS7 1158 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 VPS45Q9NRW7 570 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 PCDHB9Q9Y5E1 797 aa27.7■■■□□ 2.03
SMARCD3-201ENST00000262188 A0A0U1RQS6 177 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 SUN1O94901 812 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 PIRTP0C851 137 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 COL9A1P20849 921 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 NTSR1P30989 418 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 CDK18Q07002 472 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 BCL2L1Q07817 233 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 IFT43Q96FT9 208 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 FAM129BQ96TA1 746 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 TRAFD1O14545 582 aaPredicted RBP27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 ATXN1LP0C7T5 689 aaKnown RBP27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 FASTKD3Q14CZ7 662 aaKnown RBP27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 SIRPB2Q5JXA9 342 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 RANBP10Q6VN20 620 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 TAX1BP1Q86VP1 789 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 UBALD2Q8IYN6 164 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 MPP5Q8N3R9 675 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 LPCAT1Q8NF37 534 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 BCAS4Q8TDM0 211 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 SLC6A17Q9H1V8 727 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 ATP13A3Q9H7F0 1226 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 LTB4R2Q9NPC1 389 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 IL36AQ9UHA7 158 aa27.69■■■□□ 2.02
SMARCD3-201ENST00000262188 GOLGA6CA6NDK9 693 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 GOLGA6BA6NDN3 693 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 COQ9O75208 318 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 GOLGA6DP0CG33 693 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 STARD6P59095 220 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 SEMG2Q02383 582 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 ZCCHC9Q8N567 271 aaKnown RBP27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 DNAAF3Q8N9W5 541 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 FLCNQ8NFG4 579 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 KLHL32Q96NJ5 620 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 FMO2Q99518 471 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 TRIM56Q9BRZ2 755 aaKnown RBP27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 CAPS2Q9BXY5 557 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 LMAN1LQ9HAT1 526 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 C2orf42Q9NWW7 574 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 GOLGA6AQ9NYA3 693 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 KANSL1LA0AUZ9 987 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 FAM170BA6NMN3 283 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 PLK4O00444 970 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 STK25O00506 426 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 CES1P23141 567 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 TNFRSF8P28908 595 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 IFFO1Q0D2I5 559 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 FZD5Q13467 585 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 SLC1A5Q15758 541 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 CERCAMQ5T4B2 595 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 UBAP2Q5T6F2 1119 aaKnown RBP27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 MMAAQ8IVH4 418 aaKnown RBP27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 PAF1Q8N7H5 531 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 TBC1D17Q9HA65 648 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 CD248Q9HCU0 757 aa27.68■■■□□ 2.02
SMARCD3-201ENST00000262188 LOC285095A0A1B0GVY8 99 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 ERI2A8K979 691 aaKnown RBP27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 SLMAPQ14BN4 828 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 BBS9Q3SYG4 887 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 TJAP1Q5JTD0 557 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 NAPEPLDQ6IQ20 393 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 PLPP6Q8IY26 295 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 MCUQ8NE86 351 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 WDR83Q9BRX9 315 aaKnown RBP27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 CASS4Q9NQ75 786 aa27.67■■■□□ 2.02
SMARCD3-201ENST00000262188 HOXB2P14652 356 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 CTPS1P17812 591 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 MGAT1P26572 445 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 SERPINA4P29622 427 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 HIF1AQ16665 826 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 GDPD4Q6W3E5 623 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 FEM1CQ96JP0 617 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 GABRG3Q99928 467 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 SUV39H2Q9H5I1 410 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 SUN2Q9UH99 717 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 A0A1W2PQF6 199 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 PDGFBP01127 241 aaPredicted RBP27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 ZXDAP98168 799 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 DHX9Q08211 1270 aaKnown RBP27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 GAS6Q14393 721 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 ELAVL3Q14576 367 aaKnown RBP27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 MYLKQ15746 1914 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 SNCBQ16143 134 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 TMEM92Q6UXU6 159 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 ANKMY2Q8IV38 441 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 IGDCC3Q8IVU1 814 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 OR8D1Q8WZ84 308 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 RMDN1Q96DB5 314 aa27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 CPEB1Q9BZB8 566 aaKnown RBP27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 ACTR5Q9H9F9 607 aaPredicted RBP27.66■■■□□ 2.02
SMARCD3-201ENST00000262188 CKAP5Q14008 2032 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 CCDC78A2IDD5 438 aa27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 SRRM3A6NNA2 597 aaPredicted RBP27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 KPNA3O00505 521 aaPredicted RBP27.65■■■□□ 2.02
SMARCD3-201ENST00000262188 PSMD3O43242 534 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms