RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 NSMCE3Q96MG7 304 aa20.86■□□□□ 0.93
RTCA-201ENST00000260563 RBM15Q96T37 977 aaKnown RBP eCLIP20.86■□□□□ 0.93
RTCA-201ENST00000260563 FMO2Q99518 471 aa20.86■□□□□ 0.93
RTCA-201ENST00000260563 SUV39H2Q9H5I1 410 aa20.86■□□□□ 0.93
RTCA-201ENST00000260563 CD93Q9NPY3 652 aa20.86■□□□□ 0.93
RTCA-201ENST00000260563 EIF2B3Q9NR50 452 aaKnown RBP20.86■□□□□ 0.93
RTCA-201ENST00000260563 FBXL12Q9NXK8 326 aa20.86■□□□□ 0.93
RTCA-201ENST00000260563 USP36Q9P275 1121 aaKnown RBP20.86■□□□□ 0.93
RTCA-201ENST00000260563 NCKAP1Q9Y2A7 1128 aa20.86■□□□□ 0.93
RTCA-201ENST00000260563 AAR2Q9Y312 384 aaKnown RBP20.86■□□□□ 0.93
RTCA-201ENST00000260563 CCDC151A5D8V7 595 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 GOLGA6CA6NDK9 693 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 GOLGA6BA6NDN3 693 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 RNASEH2AO75792 299 aaKnown RBP20.85■□□□□ 0.93
RTCA-201ENST00000260563 TMEM63AO94886 807 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 GOLGA6DP0CG33 693 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 DRD3P35462 400 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 TPMTP51580 245 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 PDCD7Q8N8D1 485 aaKnown RBP20.85■□□□□ 0.93
RTCA-201ENST00000260563 PDCD6IPQ8WUM4 868 aaKnown RBP20.85■□□□□ 0.93
RTCA-201ENST00000260563 SPACA7Q96KW9 195 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 MLPHQ9BV36 600 aaPredicted RBP20.85■□□□□ 0.93
RTCA-201ENST00000260563 ITM2CQ9NQX7 267 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 GOLGA6AQ9NYA3 693 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 CYP8B1Q9UNU6 501 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 PCDHGC4Q9Y5F7 938 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 RAI2Q9Y5P3 530 aa20.85■□□□□ 0.93
RTCA-201ENST00000260563 C16orf96A6NNT2 1141 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 ERI2A8K979 691 aaKnown RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 TRAFD1O14545 582 aaPredicted RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 ERLIN1O75477 346 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 ANXA9O76027 345 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 MMP2P08253 660 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 SP9P0CG40 484 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 NEK3P51956 506 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 SKOR1P84550 965 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 CCDC15Q0P6D6 951 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 TRAF2Q12933 501 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 SLC14A2Q15849 920 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 MAP9Q49MG5 647 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 USP39Q53GS9 565 aaKnown RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 BRAT1Q6PJG6 821 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 PARS2Q7L3T8 475 aaKnown RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 KLHDC8BQ8IXV7 354 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 SPATA22Q8NHS9 363 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 HCAR2Q8TDS4 363 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 OXNAD1Q96HP4 312 aaPredicted RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 PRRX2Q99811 253 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 TDRD1Q9BXT4 1180 aaKnown RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 HDAC8Q9BY41 377 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 ARGLU1Q9NWB6 273 aaPredicted RBP20.84■□□□□ 0.93
RTCA-201ENST00000260563 DKK3Q9UBP4 350 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 SERGEFQ9UGK8 458 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 FZD4Q9ULV1 537 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 NUMA1Q14980 2115 aa20.84■□□□□ 0.93
RTCA-201ENST00000260563 GOLGA8MH3BSY2 632 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 PLK4O00444 970 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 PSMD3O43242 534 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 HTRA2O43464 458 aaPredicted RBP20.83■□□□□ 0.93
RTCA-201ENST00000260563 AP2A1O95782 977 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 MT-CYBP00156 380 aaPredicted RBP20.83■□□□□ 0.93
RTCA-201ENST00000260563 GEMP55040 296 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 CDK16Q00536 496 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 CNTN1Q12860 1018 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 KCTD11Q693B1 232 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 ERN2Q76MJ5 926 aaKnown RBP20.83■□□□□ 0.93
RTCA-201ENST00000260563 PRPF39Q86UA1 669 aaKnown RBP20.83■□□□□ 0.93
RTCA-201ENST00000260563 ZCCHC9Q8N567 271 aaKnown RBP20.83■□□□□ 0.93
RTCA-201ENST00000260563 MCUQ8NE86 351 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 AENQ8WTP8 325 aaKnown RBP20.83■□□□□ 0.93
RTCA-201ENST00000260563 ECHDC3Q96DC8 303 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 UBP1Q9NZI7 540 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 WDFY4Q6ZS81 3184 aa20.83■□□□□ 0.93
RTCA-201ENST00000260563 A0A1W2PQ67 120 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 TSPAN11A1L157 253 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 IGLV3-19P01714 112 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 FAM153BP0C7A2 387 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 H2AFXP16104 143 aaPredicted RBP20.83■□□□□ 0.92
RTCA-201ENST00000260563 OXTRP30559 389 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 P2RY2P41231 377 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 MPP3Q13368 585 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 FAM153CQ494X1 144 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 ARMC12Q5T9G4 340 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 AGBL4Q5VU57 503 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 FBXL19Q6PCT2 694 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.83■□□□□ 0.92
RTCA-201ENST00000260563 PPP1R21Q6ZMI0 780 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 FAM124AQ86V42 546 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 RLN3Q8WXF3 142 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 FOXP3Q9BZS1 431 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 LRRC40Q9H9A6 602 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 VPS45Q9NRW7 570 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 ZSCAN32Q9NX65 697 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 FAM153AQ9UHL3 310 aa20.83■□□□□ 0.92
RTCA-201ENST00000260563 SPAG17Q6Q759 2223 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 LRRK1Q38SD2 2015 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 DYNC1I1O14576 645 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 SLC7A4O43246 635 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 SUN1O94901 812 aa20.82■□□□□ 0.92
RTCA-201ENST00000260563 CPP00450 1065 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms