RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CEP76Q8TAP6 659 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 NUDCD1Q96RS6 583 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 NT5MQ9NPB1 228 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 SUSD2Q9UGT4 822 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 FAM186AA6NE01 2351 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 TTC24A2A3L6 582 aaPredicted RBP16.92■□□□□ 0.3
SDCBP-201ENST00000260130 A6NNZ2 444 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 PATE3B3GLJ2 98 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 FOXD2O60548 495 aaPredicted RBP16.92■□□□□ 0.3
SDCBP-201ENST00000260130 PECAM1P16284 738 aaPredicted RBP16.92■□□□□ 0.3
SDCBP-201ENST00000260130 CD27P26842 260 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 SERPINA4P29622 427 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 SLC7A5Q01650 507 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 BCL2L1Q07817 233 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 DUOXA1Q1HG43 343 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 TUBB8Q3ZCM7 444 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 RABEPKQ7Z6M1 372 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 SCUBE2Q9NQ36 999 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 HAUS2Q9NVX0 235 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 FADS3Q9Y5Q0 445 aa16.92■□□□□ 0.3
SDCBP-201ENST00000260130 PTPRZ1P23471 2315 aaPredicted RBP16.91■□□□□ 0.3
SDCBP-201ENST00000260130 KCNK1O00180 336 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 KHNYNO15037 678 aaKnown RBP16.91■□□□□ 0.3
SDCBP-201ENST00000260130 AP1G1O43747 822 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 NEBLO76041 1014 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 PPP2CBP62714 309 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 PPP2CAP67775 309 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 SF3A2Q15428 464 aaKnown RBP16.91■□□□□ 0.3
SDCBP-201ENST00000260130 RALGPS1Q5JS13 557 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 AADACL2Q6P093 401 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 SLC23A3Q6PIS1 610 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 PRR23CQ6ZRP0 262 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 TRIM69Q86WT6 500 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 C1orf216Q8TAB5 229 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 NSMCE3Q96MG7 304 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 POLR1EQ9GZS1 481 aaKnown RBP16.91■□□□□ 0.3
SDCBP-201ENST00000260130 NOD2Q9HC29 1040 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 GVINP1Q7Z2Y8 2422 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.91■□□□□ 0.3
SDCBP-201ENST00000260130 A0A1W2PPC4 97 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 LATO43561 262 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 PCDH8O95206 1070 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 JCHAINP01591 159 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 TIMP2P16035 220 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 ABL2P42684 1182 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 ITKQ08881 620 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 TRIM61Q5EBN2 209 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 DNAJC21Q5F1R6 531 aaKnown RBP16.91■□□□□ 0.3
SDCBP-201ENST00000260130 CFAP58Q5T655 872 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 BRAT1Q6PJG6 821 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 ORAI3Q9BRQ5 295 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 HERPUD2Q9BSE4 406 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 EBF2Q9HAK2 575 aa16.91■□□□□ 0.3
SDCBP-201ENST00000260130 LAMA1P25391 3075 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 GON4LQ3T8J9 2241 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 TSPAN11A1L157 253 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 BCAT2O15382 392 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 RNGTTO60942 597 aaKnown RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 APOC2P02655 101 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 CES1P23141 567 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 IFI35P80217 286 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 ZNF211Q13398 564 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 TCEAL6Q6IPX3 200 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 PRPF39Q86UA1 669 aaKnown RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 ZCCHC9Q8N567 271 aaKnown RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 C12orf50Q8NA57 414 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 TCEAL3Q969E4 200 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 FEM1CQ96JP0 617 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 IL12RB2Q99665 862 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 SEMA3CQ99985 751 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 SLC6A14Q9UN76 642 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 PCDHGC4Q9Y5F7 938 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.9■□□□□ 0.3
SDCBP-201ENST00000260130 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
SDCBP-201ENST00000260130 A0A1B0GTW7 788 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 A0A1W2PQU0 124 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.3
SDCBP-201ENST00000260130 TSPAN6O43657 245 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 TJP3O95049 919 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 CFIP05156 583 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 SERPINF2P08697 491 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 XPAP23025 273 aaPredicted RBP16.89■□□□□ 0.3
SDCBP-201ENST00000260130 MAT2AP31153 395 aaKnown RBP16.89■□□□□ 0.3
SDCBP-201ENST00000260130 SUOXP51687 545 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 IRX4P78413 519 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 UGP2Q16851 508 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 MEI1Q5TIA1 1274 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 ALG1LQ6GMV1 187 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 HORMAD1Q86X24 394 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.3
SDCBP-201ENST00000260130 NUSAP1Q9BXS6 441 aaKnown RBP16.89■□□□□ 0.3
SDCBP-201ENST00000260130 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms