RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ACTL7BQ9Y614 415 aa17.62■□□□□ 0.41
SRSF1-201ENST00000258962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 HOXC11O43248 304 aaPredicted RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 LAMTOR5O43504 91 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 USP1O94782 785 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 INHBAP08476 426 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 CR2P20023 1033 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 MDH1P40925 334 aaKnown RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 GUCY1A3Q02108 690 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 CCINQ13939 588 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 FRG1Q14331 258 aaKnown RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 FBXO43Q4G163 708 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 PREPLQ4J6C6 727 aaPredicted RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 FSTL4Q6MZW2 842 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 LINGO4Q6UY18 593 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 MARK2Q7KZI7 788 aaKnown RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 SLC26A11Q86WA9 606 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 LRRC6Q86X45 466 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 APCDD1Q8J025 514 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 BBS5Q8N3I7 341 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 DCAF4L2Q8NA75 395 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 PRSS33Q8NF86 280 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 MFSD3Q96ES6 412 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 KIFC1Q9BW19 673 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 FBRSL1Q9HCM7 1045 aaKnown RBP17.61■□□□□ 0.41
SRSF1-201ENST00000258962 CHRAC1Q9NRG0 131 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 SLC17A6Q9P2U8 582 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 VPS51Q9UID3 782 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 ZNF180Q9UJW8 692 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 VPS28Q9UK41 221 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 KMT2EQ8IZD2 1858 aa17.61■□□□□ 0.41
SRSF1-201ENST00000258962 A0A1W2PPM1 405 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 MAGEB16A2A368 324 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 NEDD8-MDP1E9PL57 170 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 TMCC1O94876 653 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 KRT15P19012 456 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 NMBRP28336 390 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 OPRD1P41143 372 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 EIF2DP41214 584 aaKnown RBP17.6■□□□□ 0.41
SRSF1-201ENST00000258962 LMAN2Q12907 356 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 MTAPQ13126 283 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 MSLNQ13421 630 aaPredicted RBP17.6■□□□□ 0.41
SRSF1-201ENST00000258962 ANGPT1Q15389 498 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 NAIF1Q69YI7 327 aaPredicted RBP17.6■□□□□ 0.41
SRSF1-201ENST00000258962 NUDT18Q6ZVK8 323 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 ZNF771Q7L3S4 317 aaPredicted RBP17.6■□□□□ 0.41
SRSF1-201ENST00000258962 SLC25A41Q8N5S1 370 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 NAT16Q8N8M0 369 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
SRSF1-201ENST00000258962 FIBINQ8TAL6 211 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 CERS2Q96G23 380 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 LMLNQ96KR4 655 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 ZNF778Q96MU6 729 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 TRABDQ9H4I3 376 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 IL1RAPL1Q9NZN1 696 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.6■□□□□ 0.41
SRSF1-201ENST00000258962 DEC1Q9P2X7 70 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 FAM169AQ9Y6X4 670 aa17.6■□□□□ 0.41
SRSF1-201ENST00000258962 LOC285095A0A1B0GVY8 99 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 H0Y858 1186 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 EGFP01133 1207 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 PENKP01210 267 aaPredicted RBP17.59■□□□□ 0.41
SRSF1-201ENST00000258962 CYBBP04839 570 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 ATXN1LP0C7T5 689 aaKnown RBP17.59■□□□□ 0.41
SRSF1-201ENST00000258962 TYRP14679 529 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 BRAFP15056 766 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 CHN1P15882 459 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 CD70P32970 193 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 SLC6A11P48066 632 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 GNGT1P63211 74 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 POU6F1Q14863 301 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 SLC1A5Q15758 541 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 SLC14A2Q15849 920 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 GAB4Q2WGN9 574 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 PCID2Q5JVF3 399 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 ZNF449Q6P9G9 518 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 SPEM1Q8N4L4 309 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 EXOC2Q96KP1 924 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 NOD2Q9HC29 1040 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 MARK1Q9P0L2 795 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 LHX3Q9UBR4 397 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 TCAF1Q9Y4C2 921 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 MUC6Q6W4X9 2439 aa17.59■□□□□ 0.41
SRSF1-201ENST00000258962 TMEM120BA0PK00 339 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 ATG13O75143 517 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 APODP05090 189 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 ERVK-10P10266 1014 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 MGAT5Q09328 741 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 TCF15Q12870 199 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 MPP2Q14168 576 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 SMAD1Q15797 465 aaKnown RBP17.58■□□□□ 0.41
SRSF1-201ENST00000258962 SIRPB2Q5JXA9 342 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 PKN3Q6P5Z2 889 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 FEM1CQ96JP0 617 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 TRIB3Q96RU7 358 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 MRM3Q9HC36 420 aaKnown RBP17.58■□□□□ 0.41
SRSF1-201ENST00000258962 HAUS2Q9NVX0 235 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 SENP1Q9P0U3 644 aa17.58■□□□□ 0.41
SRSF1-201ENST00000258962 KIAA1522Q9P206 1035 aaPredicted RBP17.58■□□□□ 0.41
SRSF1-201ENST00000258962 INTS6Q9UL03 887 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms