RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KATNAL1Q9BW62 490 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NIFKQ9BYG3 293 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FOXP1Q9H334 677 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 MARCOQ9UEW3 520 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 HMX3A6NHT5 357 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NTSR2O95665 410 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 DDCP20711 480 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ME2P23368 584 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 RFX5P48382 616 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 MAT1AQ00266 395 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 MGAT5Q09328 741 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 POU4F2Q12837 409 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TXNRD1Q16881 649 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF181Q2M3W8 571 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 C6orf52Q5T4I8 152 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ARL6IP4Q66PJ3 421 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC6A19Q695T7 634 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CHMP1BQ7LBR1 199 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FGD2Q7Z6J4 655 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF321PQ8N8H1 164 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 OR10Z1Q8NGY1 313 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 THG1LQ9NWX6 298 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ADD3Q9UEY8 706 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF223Q9UK11 482 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM240BA0A1B0GVZ2 78 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CASC3O15234 703 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 DHX15O43143 795 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 PRKAB2O43741 272 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 IL18RAPO95256 599 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TP53P04637 393 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 SFTPCP11686 197 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 HNMTP50135 292 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 REEP5Q00765 189 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FGL1Q08830 312 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 RAB11FIP2Q7L804 512 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 NOXA1Q86UR1 476 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 FRS2Q8WU20 508 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 CORO2AQ92828 525 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 C10orf90Q96M02 699 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF578Q96N58 590 aaPredicted RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 TARS2Q9BW92 718 aaKnown RBP6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 RAB20Q9NX57 234 aa6.79□□□□□ -1.32
PDGFRA-201ENST00000257290 ABCC6O95255 1503 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TOR1AO14656 332 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KIAA0355O15063 1070 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MSH4O15457 936 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MAFO75444 373 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 GYPCP04921 128 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 IFNA4P05014 189 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 RARBP10826 455 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MXD4Q14582 209 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZC3HC1Q86WB0 502 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SP8Q8IXZ3 490 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 LPCAT1Q8NF37 534 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 OR10T2Q8NGX3 314 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KAT2AQ92830 837 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SERPINB11Q96P15 392 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SEC22CQ9BRL7 303 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 REEP4Q9H6H4 257 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 GRID1Q9ULK0 1009 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 PNPLA7Q6ZV29 1317 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 DISC1C4P0D8 188 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NT5C1B-RDH14C9J2C7 533 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 F5H423 210 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 H7C0S8 307 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC22A1O15245 554 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 STAU1O95793 577 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MMP10P09238 476 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 RPS3P23396 243 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 GPR68Q15743 365 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 HGSNATQ68CP4 663 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TIGD3Q6B0B8 471 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 DEF8Q6ZN54 512 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 RAVER1Q8IY67 606 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC2A14Q8TDB8 520 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SEC14L1Q92503 715 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TSNAXQ99598 290 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TRIM54Q9BYV2 358 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TRIT1Q9H3H1 467 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 DPEP3Q9H4B8 488 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MAGEF1Q9HAY2 307 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 USP29Q9HBJ7 922 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NFKBIL1Q9UBC1 381 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MGAT4BQ9UQ53 548 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 PIK3C2AO00443 1686 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM86C2PA6NEL3 165 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF701M0R085 212 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 RNASEH1O60930 286 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KERAO60938 352 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 GLAP06280 429 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 EIF2S3P41091 472 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MEOX2P50222 304 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 LSM3P62310 102 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 STARD3Q14849 445 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NPTX1Q15818 432 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZSWIM7Q19AV6 140 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZER1Q7Z7L7 766 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms