RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 THRAP10827 490 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 CDH3P22223 829 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 KLK7P49862 253 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 PLK1P53350 603 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 IRX1P78414 480 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 AUHQ13825 339 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SGO1Q5FBB7 561 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 LRRC69Q6ZNQ3 347 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 PIP4K2CQ8TBX8 421 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF641Q96N77 438 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 MANSC1Q9H8J5 431 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TMPRSS4Q9NRS4 437 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SCN7AQ01118 1682 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 OR6A2O95222 327 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 FKBP9O95302 570 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 CPA3P15088 417 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 HRH2P25021 359 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 HNF1BP35680 557 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF132P52740 706 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 CSTF3Q12996 717 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■■■ 29.3
PRPF38A-201ENST00000257181 TEAD2Q15562 447 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 FKBP9P1Q75LS8 142 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 PHF21AQ96BD5 680 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 CFL2Q9Y281 166 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 ARL2BPQ9Y2Y0 163 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.258e-6■■■■□ 25.2
PRPF38A-201ENST00000257181 PRMT5O14744 637 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 WNT9AO14904 365 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 UGT2B4P06133 528 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 RHOP08100 348 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 OGNP20774 298 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 RBMS1P29558 406 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 HOXC13P31276 330 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SMIM11AP58511 58 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 WDR5P61964 334 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TAF1AQ15573 450 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 ZC3H12BQ5HYM0 836 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SEL1L3Q68CR1 1132 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SFMBT1Q9UHJ3 866 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 GMNCA6NCL1 334 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 COL6A2P12110 1019 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TEX44Q53QW1 395 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TCEAL8Q8IYN2 117 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SH3GL3Q99963 347 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 GKN1Q9NS71 199 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 LEFTY2O00292 366 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 BTN3A1O00481 513 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 APBB3O95704 486 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 SLC35G6P0C7Q6 338 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 FCGR1AP12314 374 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 NFKB1P19838 968 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 FMO4P31512 558 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 CXCR3P49682 368 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 FMO1Q01740 532 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 HIC1Q14526 733 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TMEM132CQ8N3T6 1108 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 TRIM51Q9BSJ1 452 aa13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 EIF2B3Q9NR50 452 aaKnown RBP13.48□□□□□ -0.25
PRPF38A-201ENST00000257181 USP1O94782 785 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 GJB5O95377 273 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 ELOAQ14241 798 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 MFSD7Q6UXD7 560 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 B3GNT5Q9BYG0 378 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 TTYH3Q9C0H2 523 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 ING2Q9H160 280 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 DMAC2Q9NW81 257 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 PADI2Q9Y2J8 665 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 MBLAC1A4D2B0 266 aaPredicted RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 TMEM191CA6NGB0 347 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 DFNA5O60443 496 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 CER1O95813 267 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 PCCBP05166 539 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 DLG4P78352 724 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 MCEMP1Q8IX19 187 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 BCLAF3A2AJT9 711 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 CDK14O94921 469 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 VAPBO95292 243 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 CCNYL3P0C7X3 344 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 ATP5A1P25705 553 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 MROH9Q5TGP6 573 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 UBALD2Q8IYN6 164 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 ZCCHC9Q8N567 271 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 RAD51AP1Q96B01 352 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 TMEM121Q9BTD3 319 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 TRMOQ9BU70 441 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 PCDH18Q9HCL0 1135 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 ALG13Q9NP73 1137 aaKnown RBP13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 IGKV6D-21A0A0A0MT36 114 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 RGSL1A5PLK6 1076 aa13.47□□□□□ -0.25
PRPF38A-201ENST00000257181 RAD51CO43502 376 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms