RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 RFX3P48380 749 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 ATF7IP2Q5U623 682 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 LIPMQ5VYY2 423 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 FAM131BQ86XD5 332 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 ASCC1Q8N9N2 400 aaKnown RBP13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 CD320Q9NPF0 282 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 IL17RBQ9NRM6 502 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 WWP2O00308 870 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 CABYRO75952 493 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 GNA12Q03113 381 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 BNIP3Q12983 259 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 PLEKHG4Q58EX7 1191 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 ANKRD26P1Q6NSI1 321 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 PTCHD4Q6ZW05 846 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 PIH1D2Q8WWB5 315 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 TRNT1Q96Q11 434 aaKnown RBP13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 CDHR5Q9HBB8 845 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 KCNQ5Q9NR82 932 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 GRIP1Q9Y3R0 1128 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 LRRC42Q9Y546 428 aa13.22□□□□□ -0.29
PCDHGA3-201ENST00000253812 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 TEX46H3BTG2 121 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 GH1P01241 217 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 HNRNPH3P31942 346 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 GPD2P43304 727 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 ACSM2AQ08AH3 577 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 EIF2B5Q13144 721 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 ADGRE1Q14246 886 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SV2CQ496J9 727 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 ACSM2BQ68CK6 577 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SMG8Q8ND04 991 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 MTFR1LQ9H019 292 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 HIPK3Q9H422 1215 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 GIT1Q9Y2X7 761 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 DHRS7Q9Y394 339 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 FAM205AQ6ZU69 1335 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 A0A1W2PPM1 405 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 MSH4O15457 936 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 HMBSP08397 361 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 LTA4HP09960 611 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 IDO1P14902 403 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 GLRA2P23416 452 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 PRDX6P30041 224 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SNAPC1Q16533 368 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 OCLNQ16625 522 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 HSD17B12Q53GQ0 312 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 POTEHQ6S545 545 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 CNTD1Q8N815 330 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 TLCD1Q96CP7 247 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 ITPKCQ96DU7 683 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 POP1Q99575 1024 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 ZSCAN5AQ9BUG6 496 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 PDGFCQ9NRA1 345 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 PRMT7Q9NVM4 692 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 GDAP2Q9NXN4 497 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SALL1Q9NSC2 1324 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SPTLC1O15269 473 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 CYP4B1P13584 511 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 TPH1P17752 444 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 MYL6P60660 151 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 GCNT1Q02742 428 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 XKRXQ6PP77 449 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 CES3Q6UWW8 571 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 SYT12Q8IV01 421 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 FCGR1BQ92637 280 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 NPAS2Q99743 824 aa13.21□□□□□ -0.29
PCDHGA3-201ENST00000253812 HPCAL1P37235 193 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 CTSKP43235 329 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 CCSAPQ6IQ19 270 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 ZNF720Q7Z2F6 126 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 ZZZ3Q8IYH5 903 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 ALLCQ8N6M5 410 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 STAG3L4Q8TBR4 150 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 MCOLN3Q8TDD5 553 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 YTHDF1Q9BYJ9 559 aaKnown RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 IFT80Q9P2H3 777 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 SLC17A7Q9P2U7 560 aa13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.3
PCDHGA3-201ENST00000253812 SMIM22K7EJ46 135 aa13.2□□□□□ -0.3
PCDHGA3-201ENST00000253812 RGL2O15211 777 aa13.2□□□□□ -0.3
PCDHGA3-201ENST00000253812 LIASO43766 372 aa13.2□□□□□ -0.3
PCDHGA3-201ENST00000253812 ALDH3A2P51648 485 aa13.2□□□□□ -0.3
PCDHGA3-201ENST00000253812 UGT2B15P54855 530 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms