RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PCDHGA2Q9Y5H1 932 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 FADS3Q9Y5Q0 445 aa14.2□□□□□ -0.14
VPS25-201ENST00000253794 CTAGE15A4D2H0 777 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 ANKRD66B4E2M5 251 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
VPS25-201ENST00000253794 TTI1O43156 1089 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 PMPCBO75439 489 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 FGF1P05230 155 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CTAGE8P0CG41 777 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 NFKBIAP25963 317 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CD6P30203 668 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 MMP12P39900 470 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 ELP6Q0PNE2 266 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 PPP1R7Q15435 360 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 SLC1A5Q15758 541 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 QPCTQ16769 361 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 POM121L1PQ3SYA9 428 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 TMEM52BQ4KMG9 183 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 SPDYCQ5MJ68 293 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CFAP58Q5T655 872 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 DENND5AQ6IQ26 1287 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 FBXL19Q6PCT2 694 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.19□□□□□ -0.14
VPS25-201ENST00000253794 DPPA4Q7L190 304 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CTAGE6Q86UF2 777 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CTAGE4Q8IX94 777 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 RAVER1Q8IY67 606 aaKnown RBP14.19□□□□□ -0.14
VPS25-201ENST00000253794 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.19□□□□□ -0.14
VPS25-201ENST00000253794 OR2T34Q8NGX1 318 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 LRRC45Q96CN5 670 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 IFT43Q96FT9 208 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 SPACA7Q96KW9 195 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
VPS25-201ENST00000253794 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CYP8B1Q9UNU6 501 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CHKBQ9Y259 395 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 ANKRD36A6QL64 1941 aa14.19□□□□□ -0.14
VPS25-201ENST00000253794 CACNA1HO95180 2353 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 CAPN8A6NHC0 703 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 BHMG1C9JSJ3 638 aaPredicted RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 H0Y858 1186 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 PLK4O00444 970 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 RAD51CO43502 376 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 TSPAN6O43657 245 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 ACSL1P33121 698 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 GPS1Q13098 491 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 MSLNQ13421 630 aaPredicted RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 KCNJ11Q14654 390 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 FAXCQ5TGI0 409 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 NAPEPLDQ6IQ20 393 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 ERAP2Q6P179 960 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 SLC36A4Q6YBV0 504 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 USP45Q70EL2 814 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 LINC00523Q86TU6 105 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 TTC7BQ86TV6 843 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 TRIM69Q86WT6 500 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 NDUFAF2Q8N183 169 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 CBARPQ8N350 705 aaPredicted RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 IPMKQ8NFU5 416 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 CADM4Q8NFZ8 388 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 PDCD6IPQ8WUM4 868 aaKnown RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 GAB3Q8WWW8 586 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 CPT1BQ92523 772 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 TOE1Q96GM8 510 aaKnown RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 TBL1YQ9BQ87 522 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 FSD1LQ9BXM9 530 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 PCDH12Q9NPG4 1184 aa14.18□□□□□ -0.14
VPS25-201ENST00000253794 MBD1Q9UIS9 605 aaPredicted RBP14.18□□□□□ -0.14
VPS25-201ENST00000253794 EML5Q05BV3 1969 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 LRRC72A6NJI9 287 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 F5H423 210 aaPredicted RBP14.17□□□□□ -0.14
VPS25-201ENST00000253794 SMAPO00193 183 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 DNALI1O14645 258 aaPredicted RBP14.17□□□□□ -0.14
VPS25-201ENST00000253794 LATO43561 262 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 SEMA4FO95754 770 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 CYP2A6P11509 494 aaPredicted RBP14.17□□□□□ -0.14
VPS25-201ENST00000253794 CCR5P51681 352 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 CREB5Q02930 508 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 RALGDSQ12967 914 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 AGERQ15109 404 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 TRIP13Q15645 432 aaPredicted RBP14.17□□□□□ -0.14
VPS25-201ENST00000253794 PCSK7Q16549 785 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 CDKN3Q16667 212 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 TMEM259Q4ZIN3 620 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 GLE1Q53GS7 698 aaKnown RBP14.17□□□□□ -0.14
VPS25-201ENST00000253794 SIRPB2Q5JXA9 342 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 KIAA1161Q6NSJ0 714 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 HOOK3Q86VS8 718 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 NAT8LQ8N9F0 302 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 LPCAT1Q8NF37 534 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 OR14C36Q8NHC7 312 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 GANCQ8TET4 914 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 ASB12Q8WXK4 309 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 SEC14L1Q92503 715 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 C19orf43Q9BQ61 176 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 ERP44Q9BS26 406 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 FICDQ9BVA6 458 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 TRABDQ9H4I3 376 aa14.17□□□□□ -0.14
VPS25-201ENST00000253794 MAGEE1Q9HCI5 957 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms