RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CSHL1Q14406 222 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 PTPRCAPQ14761 206 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 TMEM199Q8N511 208 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 TEX26Q8N6G2 289 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 TXNDC5Q8NBS9 432 aaKnown RBP18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 IGSF5Q9NSI5 407 aa18.83■□□□□ 0.61
PDLIM4-201ENST00000253754 DRGXA6NNA5 263 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 ADAM12O43184 909 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 TLR5O60602 858 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 ATXN1LP0C7T5 689 aaKnown RBP18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 COL6A2P12110 1019 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 SERPINB5P36952 375 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 GPR17Q13304 367 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 NAA25Q14CX7 972 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 ANKS3Q6ZW76 656 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 OTOP2Q7RTS6 562 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 SH3RF2Q8TEC5 729 aa18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 MARCH4Q9P2E8 410 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-201ENST00000253754 LTBP2Q14767 1821 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 RTN3O95197 1032 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 ATF6P18850 670 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 TFEBP19484 476 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 GLDCP23378 1020 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 EPHB1P54762 984 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 SLC12A2P55011 1212 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 ACTR3P61158 418 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 WDR5P61964 334 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 KLF10Q13118 480 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 SERINC3Q13530 473 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 CUL3Q13618 768 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 LSM12Q3MHD2 195 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 FAM219BQ5XKK7 198 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 SEL1L3Q68CR1 1132 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 RPS27LQ71UM5 84 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 OR6P1Q8NGX9 317 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 HDAC10Q969S8 669 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 IGSF21Q96ID5 467 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 SEMA3CQ99985 751 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 MRPL46Q9H2W6 279 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 SUDS3Q9H7L9 328 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 VPS45Q9NRW7 570 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 STX18Q9P2W9 335 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 DOCK4Q8N1I0 1966 aa18.82■□□□□ 0.6
PDLIM4-201ENST00000253754 A0A0D9SEW6 157 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 HDAC3O15379 428 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 PIRTP0C851 137 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 COX4I1P13073 169 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 ITGAXP20702 1163 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 POU4F1Q01851 419 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 LBRQ14739 615 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 PDCD2Q16342 344 aaPredicted RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 TRMT5Q32P41 509 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 PPM1LQ5SGD2 360 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 TMEM198Q66K66 360 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 LRRC74BQ6ZQY2 392 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 CCDC124Q96CT7 223 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 CMTM5Q96DZ9 223 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 MARK4Q96L34 752 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 POMKQ9H5K3 350 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 CYP4F12Q9HCS2 524 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 OLA1Q9NTK5 396 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 COL4A6Q14031 1691 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 H7C4K7 107 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 TBC1D4O60343 1298 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 RPL17P18621 184 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 KCNA5P22460 613 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 ABL2P42684 1182 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 GALNT3Q14435 633 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 MUM1Q2TAK8 710 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 EML3Q32P44 896 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 USP41Q3LFD5 358 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 LGI2Q8N0V4 545 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 OR52K2Q8NGK3 314 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 SPPL2BQ8TCT7 592 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 DNAJC9Q8WXX5 260 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 ZNF689Q96CS4 500 aaPredicted RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 LENG8Q96PV6 779 aaPredicted RBP18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 VN1R3Q9BXE9 311 aa18.81■□□□□ 0.6
PDLIM4-201ENST00000253754 A0A087X1B8 175 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 F8W8V4 182 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 NVLO15381 856 aaKnown RBP18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 TACR2P21452 398 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 SLC6A4P31645 630 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 VHLP40337 213 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 POLD2P49005 469 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 IL10RBQ08334 325 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 BTG3Q14201 252 aaPredicted RBP18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 FSCBQ5H9T9 825 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 LCA5Q86VQ0 697 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 CILP2Q8IUL8 1156 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 DEFB107AQ8IZN7 70 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 ANKRD49Q8WVL7 239 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 FATE1Q969F0 183 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 TADA1Q96BN2 335 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 RANBP9Q96S59 729 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 SSX2IPQ9Y2D8 614 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 ARL5AQ9Y689 179 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 MROH6A6NGR9 719 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 HNRNPLP14866 589 aaKnown RBP eCLIP18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 LEPRP48357 1165 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms