RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SLC27A5Q9Y2P5 690 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 PCDHGA4Q9Y5G9 962 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 STX16-NPEPL1H3BU86 382 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 NAT1P18440 290 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 PRKAA2P54646 552 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 PPP2R5DQ14738 602 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 MARK4Q96L34 752 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 ZBTB26Q9HCK0 441 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 PREBQ9HCU5 417 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 ANLNQ9NQW6 1124 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 CNGB3Q9NQW8 809 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 IARS2Q9NSE4 1012 aaKnown RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 SLC39A10Q9ULF5 831 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 ANKRD6Q9Y2G4 727 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 PTPRDP23468 1912 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 HNRNPRO43390 633 aaKnown RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 TFEBP19484 476 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 NOS2P35228 1153 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 SLC5A3P53794 718 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 CREB5Q02930 508 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 DPYSQ14117 519 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 ANO4Q32M45 955 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 NPY6RQ99463 290 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 MCMBPQ9BTE3 642 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 SLC2A11Q9BYW1 496 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 EFCAB1Q9HAE3 211 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 ARHGAP10A1A4S6 786 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 VAPBO95292 243 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 SBK3P0C264 359 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 HPCAP84074 193 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 CERCAMQ5T4B2 595 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 TMEM102Q8N9M5 508 aaPredicted RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 MRPL1Q9BYD6 325 aaKnown RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 DDX18Q9NVP1 670 aaKnown RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 PADI4Q9UM07 663 aa17.11■□□□□ 0.33
FOXA1-201ENST00000250448 MAGED2Q9UNF1 606 aaPredicted RBP17.11■□□□□ 0.33
FOXA1-201ENST00000250448 SLCO1B7G3V0H7 640 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 I6L893 689 aaPredicted RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 EEF2KO00418 725 aaKnown RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 ACOT8O14734 319 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 DCLK1O15075 740 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 JUNP05412 331 aaKnown RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 CPB1P15086 417 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 GRM3Q14832 879 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 BORAQ6PGQ7 559 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 CNTD1Q8N815 330 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 SCYL1Q96KG9 808 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 GPR22Q99680 433 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 CRISPLD1Q9H336 500 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 TLK1Q9UKI8 766 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 SNX10Q9Y5X0 201 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 RANBP2P49792 3224 aaKnown RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 ARHGEF37A1IGU5 675 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 CSRP3P50461 194 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 NAGLUP54802 743 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 NR1H2P55055 460 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 PAOXQ6QHF9 649 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 ALDH16A1Q8IZ83 802 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 TMEM151AQ8N4L1 468 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 TMA16Q96EY4 203 aaKnown RBP17.1■□□□□ 0.33
FOXA1-201ENST00000250448 TMEM165Q9HC07 324 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 DDIT4Q9NX09 232 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 GALNT8Q9NY28 637 aa17.1■□□□□ 0.33
FOXA1-201ENST00000250448 PHGDHO43175 533 aaKnown RBP17.09■□□□□ 0.33
FOXA1-201ENST00000250448 ADAM12O43184 909 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
FOXA1-201ENST00000250448 HADHAP40939 763 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 CNKSR3Q6P9H4 555 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 LSMEM2Q8N112 164 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 LRRC43Q8N309 656 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 NPAS2Q99743 824 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 MLPHQ9BV36 600 aaPredicted RBP17.09■□□□□ 0.33
FOXA1-201ENST00000250448 COPG1Q9Y678 874 aaKnown RBP17.09■□□□□ 0.33
FOXA1-201ENST00000250448 TRIM38O00635 465 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 HOXA2O43364 376 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 SAT1P21673 171 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 GLRBP48167 497 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 CD151P48509 253 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 C1orf53Q5VUE5 145 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 KCTD11Q693B1 232 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 AMIGO2Q86SJ2 522 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 YIPF2Q9BWQ6 316 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 CNOT11Q9UKZ1 510 aaKnown RBP17.09■□□□□ 0.33
FOXA1-201ENST00000250448 STAP1Q9ULZ2 295 aa17.09■□□□□ 0.33
FOXA1-201ENST00000250448 TCAF2A6NFQ2 919 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.33
FOXA1-201ENST00000250448 ADRM1Q16186 407 aa17.08■□□□□ 0.33
FOXA1-201ENST00000250448 RNF19BQ6ZMZ0 732 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms