RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TMEM109Q9BVC6 243 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 TNKS2Q9H2K2 1166 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 LRRC4CQ9HCJ2 640 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 NINJ2Q9NZG7 142 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 PCDHGC4Q9Y5F7 938 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
LSM8-201ENST00000249299 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 MROH6A6NGR9 719 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 F5H423 210 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 USP12O75317 370 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 ALDH1A2O94788 518 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 MGAT1P26572 445 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 NTSR1P30989 418 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 STX2P32856 288 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 SOX9P48436 509 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 CCDC15Q0P6D6 951 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 NAB1Q13506 487 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 SLC29A2Q14542 456 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 STAT4Q14765 748 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 MLF2Q15773 248 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 UAP1Q16222 522 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 KYNUQ16719 465 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 ZNF805Q5CZA5 627 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 SYCP2LQ5T4T6 812 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 FAM46CQ5VWP2 391 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 TXNDC11Q6PKC3 985 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 CAMK1DQ8IU85 385 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 RYBPQ8N488 228 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 PPHLN1Q8NEY8 458 aaKnown RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 GABPB2Q8TAK5 448 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 SCG3Q8WXD2 468 aaKnown RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 RMDN1Q96DB5 314 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 SCRN2Q96FV2 425 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 C9orf72Q96LT7 481 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 PWWP2AQ96N64 755 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 MCCC1Q96RQ3 725 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 ROPN1BQ9BZX4 212 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 EPB41L4BQ9H329 900 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 ROPN1Q9HAT0 212 aaPredicted RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
LSM8-201ENST00000249299 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 CHKBQ9Y259 395 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 TCAF1Q9Y4C2 921 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 PCDHB9Q9Y5E1 797 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 MAD1L1Q9Y6D9 718 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 STON1Q9Y6Q2 735 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 FAM169AQ9Y6X4 670 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 COL4A3Q01955 1670 aa13.02□□□□□ -0.33
LSM8-201ENST00000249299 A0A0J9YYE9 177 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 TRBC1P01850 177 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 IVLP07476 585 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 PAMP19021 973 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 PRKCHP24723 683 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 IL12RB1P42701 662 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 EPHB1P54762 984 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 ACVR1Q04771 509 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 CCINQ13939 588 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 FASTKD3Q14CZ7 662 aaKnown RBP13.01□□□□□ -0.33
LSM8-201ENST00000249299 TAF1AQ15573 450 aaPredicted RBP13.01□□□□□ -0.33
LSM8-201ENST00000249299 QPCTQ16769 361 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 CERCAMQ5T4B2 595 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 EGFLAMQ63HQ2 1017 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 CASC4Q6P4E1 433 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 USP45Q70EL2 814 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 LMNTD2Q8IXW0 634 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 AGGF1Q8N302 714 aaeCLIP13.01□□□□□ -0.33
LSM8-201ENST00000249299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
LSM8-201ENST00000249299 STYXQ8WUJ0 223 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 UBLCP1Q8WVY7 318 aaPredicted RBP13.01□□□□□ -0.33
LSM8-201ENST00000249299 FAM3CQ92520 227 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 SGSM3Q96HU1 749 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 APOL2Q9BQE5 337 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
LSM8-201ENST00000249299 SYBUQ9NX95 663 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 MOCS1Q9NZB8 636 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 HCN2Q9UL51 889 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 CHMP2BQ9UQN3 213 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 KIAA1549LQ6ZVL6 1849 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 SHROOM3Q8TF72 1996 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 MYOFQ9NZM1 2061 aa13.01□□□□□ -0.33
LSM8-201ENST00000249299 C5orf42Q9H799 3197 aa13□□□□□ -0.33
LSM8-201ENST00000249299 MYO18AQ92614 2054 aaKnown RBP13□□□□□ -0.33
LSM8-201ENST00000249299 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
LSM8-201ENST00000249299 C2orf81A6NN90 581 aa13□□□□□ -0.33
LSM8-201ENST00000249299 C1QTNF3-AMACRE9PGA6 284 aa13□□□□□ -0.33
LSM8-201ENST00000249299 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms