RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LRRC14BA6NHZ5 514 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 TNPO2O14787 897 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 IPO13O94829 963 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 CYP11A1P05108 521 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 SERPINH1P50454 418 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 CHN2P52757 468 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 CDKL1Q00532 357 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 YWHAHQ04917 246 aaPredicted RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 IL23RQ5VWK5 629 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 MRPL10Q7Z7H8 261 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 SERINC5Q86VE9 423 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 LZTR1Q8N653 840 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 SLC45A3Q96JT2 553 aa25.7■■□□□ 1.7
RAB40C-201ENST00000248139 MAELQ96JY0 434 aaKnown RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 C6orf203Q9P0P8 240 aaPredicted RBP25.7■■□□□ 1.7
RAB40C-201ENST00000248139 A0A087X1B8 175 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 M0QZQ0 153 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 FBP2O00757 339 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 ACOT8O14734 319 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 CRTAMO95727 393 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 FGFR3P22607 806 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 PSME3P61289 254 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 MGAT3Q09327 533 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 EFEMP1Q12805 493 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 CYP2R1Q6VVX0 501 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 PDCD6IPQ8WUM4 868 aaKnown RBP25.69■■□□□ 1.7
RAB40C-201ENST00000248139 PCDHGA7Q9Y5G6 932 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 PRSS56P0CW18 603 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 RGS2P41220 211 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 TUSC3Q13454 348 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 TIGD7Q6NT04 549 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-201ENST00000248139 IYDQ6PHW0 289 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 PELI3Q8N2H9 469 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 SLC25A51Q9H1U9 297 aa25.69■■□□□ 1.7
RAB40C-201ENST00000248139 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.69■■□□□ 1.7
RAB40C-201ENST00000248139 SUPT7LO94864 414 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 MMP2P08253 660 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 NRF1Q16656 503 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 AFMIDQ63HM1 303 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 MRPL1Q9BYD6 325 aaKnown RBP25.68■■□□□ 1.7
RAB40C-201ENST00000248139 FAM192AQ9GZU8 254 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 UXTQ9UBK9 157 aaPredicted RBP25.68■■□□□ 1.7
RAB40C-201ENST00000248139 ACTL7AQ9Y615 435 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 MIA3Q5JRA6 1907 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 TRPC5OSA6NMA1 111 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 TADA2AO75478 443 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 LTA4HP09960 611 aaKnown RBP25.68■■□□□ 1.7
RAB40C-201ENST00000248139 HUNKP57058 714 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 PFKPQ01813 784 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 MARC1Q5VT66 337 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 SETD3Q86TU7 594 aaPredicted RBP25.68■■□□□ 1.7
RAB40C-201ENST00000248139 PGBD5Q8N414 524 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 IGSF8Q969P0 613 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 B3GALT6Q96L58 329 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 C3orf30Q96M34 536 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 AP4B1Q9Y6B7 739 aa25.68■■□□□ 1.7
RAB40C-201ENST00000248139 TDRD15B5MCY1 1934 aaKnown RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 A0A0U1RQF3 1178 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 HEATR9A2RTY3 570 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 UBDO15205 165 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 ATP6V1B1P15313 513 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 FASTKQ14296 549 aaKnown RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 AGAP9Q5VTM2 703 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 MYEOVQ96EZ4 313 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 IMP4Q96G21 291 aaKnown RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 TBATAQ96M53 351 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 TBC1D13Q9NVG8 400 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 PRG3Q9Y2Y8 225 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 VWA7Q9Y334 891 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 A0A1B0GTW7 788 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 PEX1O43933 1283 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 BCAS2O75934 225 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 SIX3O95343 332 aaPredicted RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 ROR2Q01974 943 aaKnown RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 LPIN1Q14693 890 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 RARS2Q5T160 578 aaKnown RBP25.67■■□□□ 1.7
RAB40C-201ENST00000248139 MAP3K21Q5TCX8 1036 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 CYHR1Q6ZMK1 362 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 CILP2Q8IUL8 1156 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 CENPKQ9BS16 269 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 GMIPQ9P107 970 aa25.67■■□□□ 1.7
RAB40C-201ENST00000248139 DUSP11O75319 330 aaKnown RBP25.66■■□□□ 1.7
RAB40C-201ENST00000248139 XIAPP98170 497 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 GRM2Q14416 872 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 MS4A13Q5J8X5 152 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 SIRPB2Q5JXA9 342 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 CST9Q5W186 159 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 RAP1GAP2Q684P5 730 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 LCA5Q86VQ0 697 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 FAM110BQ8TC76 370 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 SP110Q9HB58 689 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 Q9Y3F1 56 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 A0A1B0GVG6 124 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 PSMD12O00232 456 aaPredicted RBP25.66■■□□□ 1.7
RAB40C-201ENST00000248139 GPC4O75487 556 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 LEPRP48357 1165 aaKnown RBP25.66■■□□□ 1.7
RAB40C-201ENST00000248139 HK2P52789 917 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 PRAMEP78395 509 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 KLHDC9Q8NEP7 349 aa25.66■■□□□ 1.7
RAB40C-201ENST00000248139 PTCD2Q8WV60 388 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms