RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NCKIPSDQ9NZQ3 722 aa17.48■□□□□ 0.39
LRFN3-201ENST00000246529 VTI1BQ9UEU0 232 aa17.48■□□□□ 0.39
LRFN3-201ENST00000246529 COPG1Q9Y678 874 aaKnown RBP17.48■□□□□ 0.39
LRFN3-201ENST00000246529 ARL5AQ9Y689 179 aa17.48■□□□□ 0.39
LRFN3-201ENST00000246529 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
LRFN3-201ENST00000246529 MROH6A6NGR9 719 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 CFLARO15519 480 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 SLC4A1P02730 911 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 KCNC1P48547 511 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 SULT2A1Q06520 285 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 GALNT3Q14435 633 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 FAM83EQ2M2I3 478 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 AAGABQ6PD74 315 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 DHDDSQ86SQ9 333 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 TEX26Q8N6G2 289 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 USP13Q92995 863 aaPredicted RBP17.47■□□□□ 0.39
LRFN3-201ENST00000246529 RANBP9Q96S59 729 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 VPS45Q9NRW7 570 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 IL37Q9NZH6 218 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 DLGAP2Q9P1A6 1054 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 FNIP2Q9P278 1114 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 MTMR11A4FU01 709 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 STX16-NPEPL1H3BU86 382 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 SDHDO14521 159 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 LDB2O43679 373 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 NPHS1O60500 1241 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 LTA4HP09960 611 aaKnown RBP17.47■□□□□ 0.39
LRFN3-201ENST00000246529 DNAJB1P25685 340 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 MAGEA11P43364 429 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 PKNOX1P55347 436 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 PRAMEP78395 509 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
LRFN3-201ENST00000246529 DSG1Q02413 1049 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 SERINC3Q13530 473 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 LBRQ14739 615 aaKnown RBP17.47■□□□□ 0.39
LRFN3-201ENST00000246529 GPR158Q5T848 1215 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 CPSF7Q8N684 471 aaKnown RBP17.47■□□□□ 0.39
LRFN3-201ENST00000246529 BLOC1S5Q8TDH9 187 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 TBATAQ96M53 351 aa17.47■□□□□ 0.39
LRFN3-201ENST00000246529 A0A0D9SEW6 157 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 S1PR4O95977 384 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 ENO3P13929 434 aaPredicted RBP17.46■□□□□ 0.39
LRFN3-201ENST00000246529 RAG1P15918 1043 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 CLCN5P51795 746 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 ATXN3P54252 364 aaPredicted RBP17.46■□□□□ 0.39
LRFN3-201ENST00000246529 PFKPQ01813 784 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 DUSP4Q13115 394 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 TAS1R1Q7RTX1 841 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 PIWIL4Q7Z3Z4 852 aaKnown RBP17.46■□□□□ 0.39
LRFN3-201ENST00000246529 TMEM173Q86WV6 379 aaPredicted RBP17.46■□□□□ 0.39
LRFN3-201ENST00000246529 CALML6Q8TD86 181 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 CDRT15Q96T59 188 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 ALG9Q9H6U8 611 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 TLR8Q9NR97 1041 aaKnown RBP17.46■□□□□ 0.39
LRFN3-201ENST00000246529 SUFUQ9UMX1 484 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 VWA7Q9Y334 891 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 FRMPD3Q5JV73 1810 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
LRFN3-201ENST00000246529 FAM92AA1XBS5 289 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 DRGXA6NNA5 263 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 SLCO1B7G3V0H7 640 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 SYN3O14994 580 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 UBTFL6P0CB48 400 aaPredicted RBP17.46■□□□□ 0.38
LRFN3-201ENST00000246529 DPP6P42658 865 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 THOP1P52888 689 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 MRPL58Q14197 206 aaKnown RBP17.46■□□□□ 0.38
LRFN3-201ENST00000246529 RTP2Q5QGT7 225 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 AGAP9Q5VTM2 703 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 ABI1Q8IZP0 508 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 SNX31Q8N9S9 440 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 KYQ8NBH2 561 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 RP9Q8TA86 221 aaKnown RBP17.46■□□□□ 0.38
LRFN3-201ENST00000246529 PDCD6IPQ8WUM4 868 aaKnown RBP17.46■□□□□ 0.38
LRFN3-201ENST00000246529 DNAJC1Q96KC8 554 aaKnown RBP17.46■□□□□ 0.38
LRFN3-201ENST00000246529 NPAS2Q99743 824 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 MARCH5Q9NX47 278 aa17.46■□□□□ 0.38
LRFN3-201ENST00000246529 VWA8A3KMH1 1905 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 H3BNX3 289 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 PRSS56P0CW18 603 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 PEX2P28328 305 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 HK2P52789 917 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 DNAJB13P59910 316 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 C1QTNF8P60827 252 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 SEMA3AQ14563 771 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 PPP1R3AQ16821 1122 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 IL31Q6EBC2 164 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 OR52K2Q8NGK3 314 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 OR13C4Q8NGS5 318 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 TADA1Q96BN2 335 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 DDX50Q9BQ39 737 aaKnown RBP17.45■□□□□ 0.38
LRFN3-201ENST00000246529 CCDC28BQ9BUN5 200 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 ZBTB26Q9HCK0 441 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.45■□□□□ 0.38
LRFN3-201ENST00000246529 PLXNA3P51805 1871 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 LOC285095A0A1B0GVY8 99 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 MAP3K13O43283 966 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 IPO13O94829 963 aaKnown RBP17.45■□□□□ 0.38
LRFN3-201ENST00000246529 MT-CO1P00395 513 aa17.45■□□□□ 0.38
LRFN3-201ENST00000246529 SLC11A1P49279 550 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms