RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CXorf40AQ8TE69 158 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 USP7Q93009 1102 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 NPY6RQ99463 290 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 EPAS1Q99814 870 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 LRRN3Q9H3W5 708 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 ABHD10Q9NUJ1 306 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 SEPT10Q9P0V9 454 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 PCDHGA7Q9Y5G6 932 aa13.96□□□□□ -0.17
DDX39A-201ENST00000242776 TLN1Q9Y490 2541 aaKnown RBP13.95□□□□□ -0.18
DDX39A-201ENST00000242776 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 TM7SF2O76062 418 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 ITGB2P05107 769 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 IRF4Q15306 451 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 PHF19Q5T6S3 580 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 MACC1Q6ZN28 852 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 SFTPA2Q8IWL1 248 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 ZSCAN1Q8NBB4 408 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 DENND6BQ8NEG7 585 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 OR8K1Q8NGG5 319 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 HTR3CQ8WXA8 447 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
DDX39A-201ENST00000242776 PDLIM2Q96JY6 352 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 AIPL1Q9NZN9 384 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 ANKMY1Q9P2S6 941 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 DNAI1Q9UI46 699 aa13.95□□□□□ -0.18
DDX39A-201ENST00000242776 NRDCO43847 1150 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 PPFIA2O75334 1257 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 CD160O95971 181 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 PTMAP06454 111 aaKnown RBP13.94□□□□□ -0.18
DDX39A-201ENST00000242776 EIF3IQ13347 325 aaKnown RBP13.94□□□□□ -0.18
DDX39A-201ENST00000242776 ELOCQ15369 112 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 SKIDA1Q1XH10 827 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 TDRD12Q587J7 1177 aaKnown RBP13.94□□□□□ -0.18
DDX39A-201ENST00000242776 FAM131BQ86XD5 332 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 ZNF354CQ86Y25 554 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 CCNJLQ8IV13 435 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 RAB7BQ96AH8 199 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 TMEM74Q96NL1 305 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 ZYG11BQ9C0D3 744 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 NDFIP2Q9NV92 336 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 STAP1Q9ULZ2 295 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 PCDHB11Q9Y5F2 797 aa13.94□□□□□ -0.18
DDX39A-201ENST00000242776 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
DDX39A-201ENST00000242776 SDK2Q58EX2 2172 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 GOLGA8SH3BPF8 625 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 ALPIP09923 528 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 HK3P52790 923 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 SLC20A2Q08357 652 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 KLHL30Q0D2K2 578 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 POLD3Q15054 466 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 IGFBP7Q16270 282 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 FAM102AQ5T9C2 384 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 KCTD16Q68DU8 428 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 RWDD4Q6NW29 188 aaKnown RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 SLC47A2Q86VL8 602 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 ZNF677Q86XU0 584 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 TP53I13Q8NBR0 393 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 PANX2Q96RD6 677 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 PDCL3Q9H2J4 239 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 PCDHGC3Q9UN70 934 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 OR1A2Q9Y585 309 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 IGLV3-10A0A075B6K4 115 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 TMX2-CTNND1H3BSU7 103 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 NVLO15381 856 aaKnown RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 RASGRP1O95267 797 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 SERPING1P05155 500 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 PCCBP05166 539 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 HNRNPH3P31942 346 aaKnown RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 CLCN1P35523 988 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 PRKCIP41743 596 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 YPEL5P62699 121 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 MYLK3Q32MK0 819 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 RAB6CQ53S08 254 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 ARTNQ5T4W7 220 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 GDPD4Q6W3E5 623 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 TMPRSS9Q7Z410 1059 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 GKN2Q86XP6 184 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 FSTL5Q8N475 847 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 OR2AP1Q8NGE2 309 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 ASB12Q8WXK4 309 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 C1orf74Q96LT6 269 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 CFAP57Q96MR6 1250 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 C1QTNF7Q9BXJ2 289 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 RAB6CQ9H0N0 254 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-201ENST00000242776 ZNF212Q9UDV6 495 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 KLQ9UEF7 1012 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 RNF215Q9Y6U7 377 aa13.93□□□□□ -0.18
DDX39A-201ENST00000242776 ARHGEF17Q96PE2 2063 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-201ENST00000242776 B4DGG1 531 aa13.92□□□□□ -0.18
DDX39A-201ENST00000242776 C9orf172C9J069 976 aa13.92□□□□□ -0.18
DDX39A-201ENST00000242776 AREL1O15033 823 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms