RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CORO1CQ9ULV4 474 aaPredicted RBP23.39■■□□□ 1.34
MSX2-201ENST00000239243 FCHO1O14526 889 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 MGRN1O60291 552 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 GREM1O60565 184 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 CBX6O95503 412 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 GLP2RO95838 553 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 HOXB8P17481 243 aaPredicted RBP23.39■■□□□ 1.33
MSX2-201ENST00000239243 ARSDP51689 593 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 ARF5P84085 180 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 LIPMQ5VYY2 423 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 FSTL5Q8N475 847 aaPredicted RBP23.39■■□□□ 1.33
MSX2-201ENST00000239243 KIF2BQ8N4N8 673 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 GPR150Q8NGU9 434 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 SCG3Q8WXD2 468 aaKnown RBP23.39■■□□□ 1.33
MSX2-201ENST00000239243 CLP1Q92989 425 aaKnown RBP23.39■■□□□ 1.33
MSX2-201ENST00000239243 GCNAQ96QF7 691 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 TDRD1Q9BXT4 1180 aaKnown RBP23.39■■□□□ 1.33
MSX2-201ENST00000239243 CPSF2Q9P2I0 782 aaKnown RBP23.39■■□□□ 1.33
MSX2-201ENST00000239243 INSL6Q9Y581 213 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 NUMBLQ9Y6R0 609 aa23.39■■□□□ 1.33
MSX2-201ENST00000239243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.38■■□□□ 1.33
MSX2-201ENST00000239243 C2orf71A6NGG8 1288 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 GFRA2O00451 464 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 HNRNPH1P31943 449 aaKnown RBP23.38■■□□□ 1.33
MSX2-201ENST00000239243 RGRP47804 291 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 CDH18Q13634 790 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 TBCCQ15814 346 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 PARP9Q8IXQ6 854 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 RMDN1Q96DB5 314 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 RILPQ96NA2 401 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 ZBED2Q9BTP6 218 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 ARL5AQ9Y689 179 aa23.38■■□□□ 1.33
MSX2-201ENST00000239243 TK2O00142 265 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 CXCL14O95715 111 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 HSPA4LO95757 839 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 CKMP06732 381 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 PFKLP17858 780 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 CDC25CP30307 473 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 SLC7A9P82251 487 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 LILRA6Q6PI73 481 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 TMC7Q7Z402 723 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 TMEM151AQ8N4L1 468 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 NSL1Q96IY1 281 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 TBATAQ96M53 351 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 ADGRE3Q9BY15 652 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 MRPL46Q9H2W6 279 aaKnown RBP23.37■■□□□ 1.33
MSX2-201ENST00000239243 VPS28Q9UK41 221 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 TRIM33Q9UPN9 1127 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 SORCS3Q9UPU3 1222 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 TMCC1O94876 653 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 FGBP02675 491 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 ALOX15P16050 662 aaPredicted RBP23.37■■□□□ 1.33
MSX2-201ENST00000239243 CALB2P22676 271 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 PTPN4P29074 926 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 PPIGQ13427 754 aaKnown RBP eCLIP23.37■■□□□ 1.33
MSX2-201ENST00000239243 FAM83EQ2M2I3 478 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 RALGPS1Q5JS13 557 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 ALYREFQ86V81 257 aaKnown RBP23.37■■□□□ 1.33
MSX2-201ENST00000239243 SLC7A6OSQ96CW6 309 aaPredicted RBP23.37■■□□□ 1.33
MSX2-201ENST00000239243 DNAJC1Q96KC8 554 aaKnown RBP23.37■■□□□ 1.33
MSX2-201ENST00000239243 EXOC2Q96KP1 924 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 MRPL57Q9BQC6 102 aaKnown RBP23.37■■□□□ 1.33
MSX2-201ENST00000239243 FEM1AQ9BSK4 669 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 EMILIN2Q9BXX0 1053 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 NMUR2Q9GZQ4 415 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 DNAJC28Q9NX36 388 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 KCTD3Q9Y597 815 aa23.37■■□□□ 1.33
MSX2-201ENST00000239243 AURKAO14965 403 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 ZMPSTE24O75844 475 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 C8AP07357 584 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 LINC00271P0C7V0 271 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 OGNP20774 298 aaKnown RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 ZNF460Q14592 562 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 HSF5Q4G112 596 aaPredicted RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 RBM20Q5T481 1227 aaKnown RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 FAM45BPQ6NSW5 357 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 GAREM2Q75VX8 874 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 TMC8Q8IU68 726 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 KLHL23Q8NBE8 558 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 FAM45AQ8TCE6 357 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 NXNL1Q96CM4 212 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 GPR78Q96P69 363 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 TMEM106CQ9BVX2 250 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 XPR1Q9UBH6 696 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 SH3BP1Q9Y3L3 701 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 TARM1B6A8C7 271 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 CD3EAPO15446 510 aaKnown RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 S1PR4O95977 384 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 GOT2P00505 430 aaKnown RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 SERPINA6P08185 405 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 KRT16P08779 473 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 SLC26A3P40879 764 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 GLRBP48167 497 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 HK2P52789 917 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 CYP4F8P98187 520 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 RIPK1Q13546 671 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 TAF1AQ15573 450 aaPredicted RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 HECTD2Q5U5R9 776 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 AGAP9Q5VTM2 703 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms