RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 C5orf60A6NFR6 353 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 SHISA7A6NL88 538 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 VAPBO95292 243 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CYP17A1P05093 508 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 KRT16P08779 473 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 DRD1P21728 446 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 DGKEP52429 567 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 GTF2A1P52655 376 aaPredicted RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 BST1Q10588 318 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 FZD5Q13467 585 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 SIM2Q14190 667 aaPredicted RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CCDC6Q16204 474 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CFAP157Q5JU67 520 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 ANO7Q6IWH7 933 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 WBP2Q969T9 261 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 MCUR1Q96AQ8 359 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 PRR11Q96HE9 360 aaPredicted RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 QKIQ96PU8 341 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 FICDQ9BVA6 458 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 XAB2Q9HCS7 855 aaKnown RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 NT5MQ9NPB1 228 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 MARCH2Q9P0N8 246 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 DEC1Q9P2X7 70 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 FBXO4Q9UKT5 387 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TICRRQ7Z2Z1 1910 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 ANTXRLA6NF34 631 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 SOBPA7XYQ1 873 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 NEMP1O14524 444 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TYROBPO43914 113 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 EDF1O60869 148 aaKnown RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 DIAPH2O60879 1101 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 ATG13O75143 517 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 APODP05090 189 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 PTPN3P26045 913 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 DMWDQ09019 674 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 WASHC5Q12768 1159 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 PRPSAP1Q14558 356 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 ZNF460Q14592 562 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 ITIH4Q14624 930 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 NXNQ6DKJ4 435 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 LDB1Q86U70 411 aaPredicted RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TMEM25Q86YD3 366 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 MAML2Q8IZL2 1156 aaPredicted RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 ADGRG2Q8IZP9 1017 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 KIRREL3Q8IZU9 778 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 BANPQ8N9N5 519 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 PPP4R1Q8TF05 950 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 RPRD1AQ96P16 312 aaPredicted RBP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TMEM120AQ9BXJ8 343 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 KDM4CQ9H3R0 1056 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS4B-201ENST00000238497 OSER1Q9NX31 292 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 SCML2Q9UQR0 700 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CHKBQ9Y259 395 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TRIM24O15164 1050 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TCEA3O75764 348 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 FSBPO95073 299 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CRYMQ14894 314 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TAZQ16635 292 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TNFAIP8L3Q5GJ75 292 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TMEM196Q5HYL7 178 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 RAP1GAP2Q684P5 730 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 C14orf80Q86SX3 495 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CCNYL1Q8N7R7 359 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 OVCA2Q8WZ82 227 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 APOPT1Q96IL0 206 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 EXOC2Q96KP1 924 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 TPSD1Q9BZJ3 242 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 CSNK1G1Q9HCP0 422 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 GMEB2Q9UKD1 530 aa8.74□□□□□ -1.01
VPS4B-201ENST00000238497 MIA3Q5JRA6 1907 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 TSPAN3O60637 253 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 GCATO75600 419 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 FBXO21O94952 628 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 KAT7O95251 611 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 ESRRAP11474 423 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-201ENST00000238497 CCR1P32246 355 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 SERPINB6P35237 376 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 FDFT1P37268 417 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 AQP5P55064 265 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 NCALDP61601 193 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 STX3Q13277 289 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 ITGA9Q13797 1035 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 CCINQ13939 588 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 OTUD1Q5VV17 481 aaPredicted RBP8.73□□□□□ -1.01
VPS4B-201ENST00000238497 RFWD3Q6PCD5 774 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 DENND1CQ8IV53 801 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 TSTD1Q8NFU3 115 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 FAXDC2Q96IV6 333 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 OMDQ99983 421 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS4B-201ENST00000238497 ZNF292O60281 2723 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 GOLGA8QA0A0J9YX86 632 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 GOLGA8OA6NCC3 632 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 GOLGA8NF8WBI6 632 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 OPHN1O60890 802 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 CCNB1P14635 433 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 NMBRP28336 390 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 COG7P83436 770 aa8.73□□□□□ -1.01
VPS4B-201ENST00000238497 USP10Q14694 798 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms