RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 KIRREL3Q8IZU9 778 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 KIAA1958Q8N8K9 716 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 ZNF557Q8N988 423 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-201ENST00000229265 FLCNQ8NFG4 579 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 GIPC2Q8TF65 315 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 LRRN4Q8WUT4 740 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 USP13Q92995 863 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-201ENST00000229265 ZNF669Q96BR6 464 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-201ENST00000229265 FEM1CQ96JP0 617 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 MRGPRX2Q96LB1 330 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 PSKH2Q96QS6 385 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 TSSK1BQ9BXA7 367 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 SMG9Q9H0W8 520 aaKnown RBP10.76□□□□□ -0.69
CDCA3-201ENST00000229265 RHOJQ9H4E5 214 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 KIF9Q9HAQ2 790 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 CYP4F11Q9HBI6 524 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 TREX1Q9NSU2 369 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 C20orf96Q9NUD7 363 aaPredicted RBP10.76□□□□□ -0.69
CDCA3-201ENST00000229265 NDFIP2Q9NV92 336 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 SEPT3Q9UH03 358 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 TLK1Q9UKI8 766 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 NUDT5Q9UKK9 219 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 MIA3Q5JRA6 1907 aa10.76□□□□□ -0.69
CDCA3-201ENST00000229265 ZFHX2Q9C0A1 2572 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 FANCMQ8IYD8 2048 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 MROH6A6NGR9 719 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 COCHO43405 550 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ATP9BO43861 1147 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 CNTN5O94779 1100 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ALDOAP04075 364 aaKnown RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 FGF1P05230 155 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HLA-DQB2P05538 268 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 SERPINF2P08697 491 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HNRNPA1P09651 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 MYL4P12829 197 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HOXA9P31269 272 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ARCN1P48444 511 aaKnown RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 KPNA2P52292 529 aaKnown RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 POU4F1Q01851 419 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ACVR1Q04771 509 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 MSLNQ13421 630 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 SLC12A1Q13621 1099 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 THOC5Q13769 683 aaKnown RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 TEAD2Q15562 447 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ALFQ53S48 1182 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 FAM91A1Q658Y4 838 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 FSTL4Q6MZW2 842 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 VITQ6UXI7 678 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HTR3DQ70Z44 454 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ASCL5Q7RTU5 278 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 OTOAQ7RTW8 1153 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 RASSF3Q86WH2 238 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HOMEZQ8IX15 550 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 LGI2Q8N0V4 545 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 CPXM2Q8N436 756 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 CCDC33Q8N5R6 958 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 CCDC63Q8NA47 563 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 GPR150Q8NGU9 434 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 ARRDC2Q8TBH0 407 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 BRSK1Q8TDC3 778 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HMCESQ96FZ2 354 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 FAM111AQ96PZ2 611 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 LRRC37BQ96QE4 947 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 GPR22Q99680 433 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 CEP41Q9BYV8 373 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 TBC1D17Q9HA65 648 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 PDFQ9HBH1 243 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 POLR3BQ9NW08 1133 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-201ENST00000229265 KCNK4Q9NYG8 393 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 SLC17A7Q9P2U7 560 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
CDCA3-201ENST00000229265 NUP210Q8TEM1 1887 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 FOXO6A8MYZ6 492 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 J3KR12 359 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 ARNTLO00327 626 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 TRAFD1O14545 582 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 PRRG1O14668 218 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 PLIN3O60664 434 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 SNNO75324 88 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 STC2O76061 302 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 PRAMEF12O95522 483 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 PENKP01210 267 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 ERVK-10P10266 1014 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 DDX6P26196 483 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 LEPRP48357 1165 aaKnown RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 SOX9P48436 509 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 CSNK1DP48730 415 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 EPHA5P54756 1037 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 SLC7A9P82251 487 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 CYP4F8P98187 520 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 SLC10A7Q0GE19 358 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 STX3Q13277 289 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 PDE1CQ14123 709 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 TSNAXIP1Q2TAA8 658 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 HSP90AA5PQ58FG0 334 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
CDCA3-201ENST00000229265 TSTD2Q5T7W7 516 aa10.74□□□□□ -0.69
CDCA3-201ENST00000229265 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms