RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ZNF839A8K0R7 811 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 RIPK2O43353 540 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 HADHAP40939 763 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ELF3P78545 371 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 BOP1Q14137 746 aaKnown RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 SNX30Q5VWJ9 437 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 UGT3A1Q6NUS8 523 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 OTOAQ7RTW8 1153 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 TRIM48Q8IWZ4 208 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ZNF786Q8N393 782 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ASB8Q9H765 288 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 TAGLN3Q9UI15 199 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 TBX21Q9UL17 535 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 COPG1Q9Y678 874 aaKnown RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ALBP02768 609 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CYP11A1P05108 521 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MYL2P10916 166 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ZNF7P17097 686 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MSH3P20585 1137 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 GP5P40197 560 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 NTHL1P78549 312 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CAP1Q01518 475 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 DSC2Q02487 901 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CSHL1Q14406 222 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MBTPS1Q14703 1052 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 RBBP7Q16576 425 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 KBTBD12Q3ZCT8 623 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CCDC157Q569K6 752 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 PCID2Q5JVF3 399 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 BPIFB1Q8TDL5 484 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 OR8D1Q8WZ84 308 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ABHD8Q96I13 439 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 FCF1Q9Y324 198 aaKnown RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 RAD54BQ9Y620 910 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 HS3ST4Q9Y661 456 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 NCF1BA6NI72 391 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 NCF1CA8MVU1 366 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 GABRDO14764 452 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 COCHO43405 550 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MT-CYBP00156 380 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 NCF1P14598 390 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 HTR7P34969 479 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CXCR3P49682 368 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 PFKPQ01813 784 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MGAT3Q09327 533 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 OVGP1Q12889 678 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 AGAP9Q5VTM2 703 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 DUPD1Q68J44 220 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MARK2Q7KZI7 788 aaKnown RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MICU2Q8IYU8 434 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 LRRC39Q96DD0 335 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 MPP4Q96JB8 637 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CNDP1Q96KN2 507 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 ZFRQ96KR1 1074 aaKnown RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 TRMT61BQ9BVS5 477 aaKnown RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 THRAP10827 490 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 TPP2P29144 1249 aaPredicted RBP9.47□□□□□ -0.89
CCDC113-201ENST00000219299 DMC1Q14565 340 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CCDC103Q8IW40 242 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 SLC7A5P2Q9GIP4 190 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 CNTN6Q9UQ52 1028 aa9.47□□□□□ -0.89
CCDC113-201ENST00000219299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 EPCAMP16422 314 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 HMOX2P30519 316 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 MAGEA10P43363 369 aaPredicted RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 THOP1P52888 689 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 STX5Q13190 355 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 HNRNPDQ14103 355 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 PPP1R15BQ5SWA1 713 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 FAM46CQ5VWP2 391 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 PDPK2PQ6A1A2 396 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 MTDHQ86UE4 582 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 ZNF598Q86UK7 904 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 PHOSPHO2Q8TCD6 241 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 TUBGCP3Q96CW5 907 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 GDF3Q9NR23 364 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 VPS45Q9NRW7 570 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 ZMYM5Q9UJ78 669 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 ADAM12O43184 909 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 DLGAP3O95886 979 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 TCN1P20061 433 aaPredicted RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 FGFR3P22607 806 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 CCNCP24863 283 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 NRLP54845 237 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 OASLQ15646 514 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 LY6G5CQ5SRR4 150 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 TTC27Q6P3X3 843 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 EFL1Q7Z2Z2 1120 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 TRMT11Q7Z4G4 463 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 CXorf40AQ8TE69 158 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 ARMC5Q96C12 935 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 EBF3Q9H4W6 596 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 CYP4F12Q9HCS2 524 aa9.46□□□□□ -0.89
CCDC113-201ENST00000219299 RUVBL2Q9Y230 463 aaKnown RBP9.46□□□□□ -0.89
CCDC113-201ENST00000219299 ZNF840PA6NDX5 716 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 SUPT7LO94864 414 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms