RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PRKCGP05129 697 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 RPS24P62847 133 aaKnown RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 CYP4F2P78329 520 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 IFI35P80217 286 aaPredicted RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 DEFB103AP81534 67 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 ZCCHC8Q6NZY4 707 aaKnown RBP13.82□□□□□ -0.2
SIX4-201ENST00000216513 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 FAM71AQ8IYT1 594 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 AHI1Q8N157 1196 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 CPXM1Q96SM3 734 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 CNPPD1Q9BV87 410 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 STOML1Q9UBI4 398 aa13.82□□□□□ -0.2
SIX4-201ENST00000216513 FOXO6A8MYZ6 492 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 CCNDBP1O95273 360 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 RB1P06400 928 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 RHOQP17081 205 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 COLEC12Q5KU26 742 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
SIX4-201ENST00000216513 SRLQ86TD4 932 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 ATL1Q8WXF7 558 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 ETNK2Q9NVF9 386 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PSME2Q9UL46 239 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PHF24Q9UPV7 400 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 CHURC1-FNTBB4DL54 471 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 ADRA1BP35368 520 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 LRRC26Q2I0M4 334 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 ATP6AP1LQ52LC2 224 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 XKR6Q5GH73 641 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PPP1R15BQ5SWA1 713 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PAFAH2Q99487 392 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 FAM83DQ9H4H8 585 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 CAAP1Q9H8G2 361 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 CCDC189A1A4V9 331 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 POU1F1P28069 291 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 AQP5P55064 265 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 NOMO3P69849 1222 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 GPR156Q8NFN8 814 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 RNF157Q96PX1 679 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PPP1R10Q96QC0 940 aaKnown RBP13.81□□□□□ -0.2
SIX4-201ENST00000216513 HGH1Q9BTY7 390 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 MID1IP1Q9NPA3 183 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 ZNF229Q9UJW7 825 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 TEDDM1Q5T9Z0 273 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 SLC30A9Q6PML9 568 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 MAMDC4Q6UXC1 1216 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 POMGNT2Q8NAT1 580 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 GANQ9H2C0 597 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 SLC40A1Q9NP59 571 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PRKAG3Q9UGI9 489 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 PIAS3Q9Y6X2 628 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 TCEA1P23193 301 aaKnown RBP13.81□□□□□ -0.2
SIX4-201ENST00000216513 CSTF2P33240 577 aaKnown RBP eCLIP13.81□□□□□ -0.2
SIX4-201ENST00000216513 CSTF1Q05048 431 aaKnown RBP13.81□□□□□ -0.2
SIX4-201ENST00000216513 MED21Q13503 144 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 RHBDF2Q6PJF5 856 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 SLC32A1Q9H598 525 aa13.81□□□□□ -0.2
SIX4-201ENST00000216513 LRRC14BA6NHZ5 514 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 FAM107AO95990 144 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 FGFR3P22607 806 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 GSTA3Q16772 222 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 LY6G5CQ5SRR4 150 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 QRFPRQ96P65 431 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 CDH19Q9H159 772 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 WRAP73Q9P2S5 460 aaPredicted RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 PPEF2O14830 753 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 OR6A2O95222 327 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 GJB5O95377 273 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 GRK2P25098 689 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 MASP1P48740 699 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SOWAHAQ2M3V2 549 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 GRTP1Q5TC63 336 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 CYP2U1Q7Z449 544 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SLC22A9Q8IVM8 553 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 KLHL28Q9NXS3 571 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 USE1Q9NZ43 259 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 ZMPSTE24O75844 475 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 ATP5HO75947 161 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 WNT3AP56704 352 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 INPP5AQ14642 412 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 NDUFA9Q16795 377 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 AP5B1Q2VPB7 878 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 CARD16Q5EG05 197 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 FIGNQ5HY92 759 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SUN3Q8TAQ9 357 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SRMSQ9H3Y6 488 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 ANKZF1Q9H8Y5 726 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SEMA4BQ9NPR2 832 aaPredicted RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 CHST7Q9NS84 486 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 VTI1BQ9UEU0 232 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 FMO1Q01740 532 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 SRSF11Q05519 484 aaKnown RBP13.8□□□□□ -0.2
SIX4-201ENST00000216513 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
SIX4-201ENST00000216513 TDHQ8IZJ6 230 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms