RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 CRABP2P29373 138 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ITGADQ13349 1161 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PIWIL2Q8TC59 973 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 SIGLEC10Q96LC7 697 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 YME1L1Q96TA2 773 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 NPY6RQ99463 290 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 TBL1YQ9BQ87 522 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 COQ6Q9Y2Z9 468 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ACOT9Q9Y305 439 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 DERAQ9Y315 318 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PDLIM1O00151 329 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 TRAFD1O14545 582 aaPredicted RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ACVRL1P37023 503 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 C21orf59P57076 290 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 NOGQ13253 232 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ALFQ53S48 1182 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 FAM219BQ5XKK7 198 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 RAVER1Q8IY67 606 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PLD6Q8N2A8 252 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 SEPT8Q92599 483 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PTCD3Q96EY7 689 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 DCUN1D1Q96GG9 259 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 OXCT2Q9BYC2 517 aaPredicted RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ALG9Q9H6U8 611 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 RSL24D1Q9UHA3 163 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 TYW5A2RUC4 315 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 E9PAM4 449 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 FBP2O00757 339 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ANXA9O76027 345 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 KCNE1P15382 129 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PSMC3P17980 439 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 GCAP28676 217 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 GABRB2P47870 512 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 CDH18Q13634 790 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 TRIM16LQ309B1 348 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 NEPROQ6NW34 567 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 DRICH1Q6PGQ1 229 aaPredicted RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PDZD8Q8NEN9 1154 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 MRPL46Q9H2W6 279 aaKnown RBP13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 NMRAL1Q9HBL8 299 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 MTMR10Q9NXD2 777 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 DSEQ9UL01 958 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 C1orf232A0A0U1RR37 186 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 RNF103-CHMP3A0A140T963 221 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 J3QRK9 145 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 NDUFS3O75489 264 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 CHRNGP07510 517 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 FLOT2Q14254 428 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 VEPH1Q14D04 833 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 TCEAL1Q15170 157 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 UPP1Q16831 310 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 ANKDD1AQ495B1 522 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 THOC7Q6I9Y2 204 aaKnown RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 OGFOD2Q6N063 350 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 ATP6V0D2Q8N8Y2 350 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 FNDC8Q8TC99 324 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 FBXL8Q96CD0 374 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 FCRL3Q96P31 734 aaPredicted RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 CINPQ9BW66 212 aaPredicted RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 PRDM16Q9HAZ2 1276 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 TMEM39AQ9NV64 488 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 XPR1Q9UBH6 696 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 EFR3BQ9Y2G0 817 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 FAM95CA0A1B0GW59 222 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 PRPF4O43172 522 aaKnown RBP eCLIP13□□□□□ -0.33
PCDHB4-201ENST00000194152 GUCA1CO95843 209 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 SERPINE1P05121 402 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 MPSTP25325 297 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 FMO4P31512 558 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 TLR1Q15399 786 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 XKR5Q6UX68 686 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 HIPK3Q9H422 1215 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 PLGRKTQ9HBL7 147 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 TCF7L2Q9NQB0 619 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 PLLPQ9Y342 182 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 MBLAC1A4D2B0 266 aaPredicted RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 SUPT3HB4E1H0 165 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 RHOBTB1O94844 696 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 VARSP26640 1264 aaKnown RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 CDH15P55291 814 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 WASHC5Q12768 1159 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 ZNF177Q13360 481 aaPredicted RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 PERM1Q5SV97 790 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 TMEM198Q66K66 360 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 SERINC5Q86VE9 423 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms