RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Clcn5Q9WVD4 746 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Kcnq2Q9Z351 759 aa13□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sbf1Q6ZPE2 1867 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Skint6A7XUZ6 1240 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyp2w1E9Q816 493 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Akain1G3UWD5 69 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Stam2O88811 523 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 P01669 111 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 LmnaP48678 665 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmem165P52875 323 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 UcmaQ14BU0 138 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mpp4Q6P7F1 635 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rfx4Q7TNK1 735 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Polr2eQ80UW8 210 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Samd4bQ80XS6 687 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rbm22Q8BHS3 420 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Csnk1g1Q8BTH8 459 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 TbcelQ8C5W3 424 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Wdr11Q8K1X1 1223 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam83aQ8K2P2 436 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zcchc14Q8VIG0 956 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmem80Q9D3H0 123 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 MecrQ9DCS3 373 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 VarsQ9Z1Q9 1263 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Btbd19S4R1I0 287 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam166bA2AIP0 273 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zmynd12A2BGJ5 363 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm10717D3Z1I8 228 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Slc4a9E9PUP3 929 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sgo2bJ3QMK1 1167 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fgf10O35565 209 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dsg3O35902 993 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cldn5O54942 218 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Psma3O70435 255 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dync1i2O88487 612 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ctbp1O88712 441 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Hmx2P43687 273 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Atoh1P48985 351 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rbp1Q00915 135 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 SelpQ01102 768 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Larp7Q05CL8 570 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ano7Q14AT5 859 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ankrd34bQ3UUF8 508 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr8Q60892 310 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Bcar1Q61140 874 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Casc4Q6P2L7 435 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Galnt10Q6P9S7 603 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr1415Q7TQS4 311 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Arhgap11aQ80Y19 987 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 IfneQ80ZF2 192 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Abhd11Q8K4F5 307 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Prrg2Q8R182 198 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr1416Q8VGU4 312 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mark1Q8VHJ5 795 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rwdd4Q9CPR1 188 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Elp3Q9CZX0 547 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Batf3Q9D275 118 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ddit4Q9D3F7 229 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam162aQ9D6U8 155 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fzd9Q9R216 592 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Racgap1Q9WVM1 628 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Arih2Q9Z1K6 492 aa12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Keap1Q9Z2X8 624 aaKnown RBP12.99□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm13276A0A087WR18 182 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm12248A0A1W2P8B8 313 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmigd3G3X8R9 209 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Arfip1G5E8V9 373 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Npr1P18293 1057 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Csf3rP40223 837 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Prox1P48437 737 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Usp46P62069 366 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Nat9Q3UG98 241 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dnajc1Q61712 552 aaKnown RBP12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Nqo1Q64669 274 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zfp606Q7TSV0 794 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 ChfrQ810L3 664 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ticam2Q8BJQ4 232 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 TpbglQ8C013 384 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Zbtb6Q8K088 423 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ppp6r2Q8R3Q2 923 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ttc39cQ8VE09 580 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 CinpQ9D0V8 212 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dlgap1Q9D415 992 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ppp1r2Q9DCL8 206 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Noa1Q9JJG9 693 aaKnown RBP12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cdh22Q9WTP5 813 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cldn3Q9Z0G9 219 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ddx39bQ9Z1N5 428 aaKnown RBP12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ccdc62E9PVD1 701 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Galnt1O08912 559 aaKnown RBP12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 LatO54957 242 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 HpcaP84075 193 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 HexdcQ3U4H6 486 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Akap14Q3V0I7 536 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Adora2aQ60613 410 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Khdrbs1Q60749 443 aaKnown RBP12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Lcp1Q61233 627 aaKnown RBP12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 ChpfQ6IQX7 774 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ccdc32Q8BS39 179 aa12.98□□□□□ -0.33
Nup88-203ENSMUST00000108531 4933409G03RikQ8C5U0 320 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms