RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 ZfaP23607 742 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 ArsaP50428 506 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Lrig1P70193 1091 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Nrg1Q6DR99 700 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 GrpQ8R1I2 146 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Frmd4bQ920B0 1035 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tnip2Q99JG7 430 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 CenpsQ9D084 142 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Dnaaf1Q9D2H9 634 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 MrrfQ9D6S7 262 aaKnown RBP11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr711Q9EPG2 314 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Smad9Q9JIW5 430 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 St6galnac1Q9QZ39 526 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm36028A0A0U1RPM1 299 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm8113E0CXS8 587 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm5160F8VPN3 147 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr596F8VQ26 312 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Srp72F8VQC1 671 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Rgs2O08849 211 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Sh3pxd2aO89032 1124 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Csf3rP40223 837 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Brcc3P46737 291 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 SirpaP97797 513 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Larp7Q05CL8 570 aaKnown RBP11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Lrrc8bQ5DU41 803 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Fbxw11Q5SRY7 542 aaKnown RBP11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Jak2Q62120 1129 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Trit1Q80UN9 467 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 C1qtnf12Q8R2Z0 308 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Sult5a1Q91X36 291 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Kat2bQ9JHD1 813 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Il17rbQ9JIP3 499 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Scamp5Q9JKD3 235 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 CasrQ9QY96 1079 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Fzd9Q9R216 592 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gm4756A0A140LIS8 335 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Cldn5O54942 218 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ctbp1O88712 441 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Mup5P11591 180 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 BrafP28028 804 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Adra2bP30545 450 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Irs1P35569 1233 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Adra1dP97714 562 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ptcd3Q14C51 685 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Znf865Q3U3I9 1058 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Msi1Q61474 362 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Cyp3a13Q64464 503 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Gba2Q69ZF3 918 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Mppe1Q80XL7 396 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Amigo1Q80ZD8 492 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Snx32Q80ZJ7 404 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 SvopQ8BFT9 548 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Pcid2Q8BFV2 399 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Best2Q8BGM5 508 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 4933402J07RikQ8BHX0 270 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ccdc32Q8BS39 179 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ttc34Q8C0Q3 554 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Slc46a2Q8CA03 479 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Vopp1Q8R1C3 172 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Slc30a5Q8R4H9 761 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr1352Q8VGX5 309 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Traf7Q922B6 594 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 NamptQ99KQ4 491 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Snrpb2Q9CQI7 225 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ppp6cQ9CQR6 305 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Q9D9D9 101 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Spag4Q9JJF2 443 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Il20Q9JKV9 176 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Cdh23Q99PF4 3354 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Dennd5bA2RSQ0 1274 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Per3O70361 1113 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 DdcO88533 480 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Krt4P07744 525 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Svs4P18419 113 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 PenkP22005 268 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Slc2a3P32037 493 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Defa8P50706 81 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Ybx1P62960 322 aaKnown RBP11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr8Q60892 310 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Rasa4Q6PFQ7 802 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Dclk2Q6PGN3 756 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tas2r129Q7M709 320 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tecpr1Q80VP0 1166 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Dlgap2Q8BJ42 1059 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Vps26bQ8C0E2 336 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Strip2Q8C9H6 844 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Slc35b2Q91ZN5 431 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Adgra2Q91ZV8 1336 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Anxa13Q99JG3 317 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Nck1Q99M51 377 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Sytl2Q99N50 950 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Pole4Q9CQ36 118 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Tubd1Q9R1K7 455 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Hs3st1O35310 311 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Hk1P17710 974 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Klrb1bP27812 223 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Dpep1P31428 410 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Lim2P56563 173 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Muc1Q02496 630 aa11.63□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Fam83fQ3UKU4 495 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms