RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Klrb1aP27811 227 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Flt3Q00342 1000 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Znf800Q0VEE6 662 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gdpd5Q640M6 607 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Acbd7Q9D258 88 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 TagapB2RWW0 714 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fbxw9F8VPX2 458 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cyp4a10O88833 509 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 AmhP27106 555 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rab10P61027 200 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Chrna5Q2MKA5 467 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Vars2Q3U2A8 1060 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fam35aQ3UEN2 891 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr389Q7TRX7 312 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Plin5Q8BVZ1 463 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gprc6aQ8K4Z6 928 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr1484Q8VEU6 315 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Snx15Q91WE1 337 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 PllpQ9DCU2 182 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Nos3P70313 1202 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lats2Q7TSJ6 1042 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 NkrfQ8BY02 690 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Lsm12Q9D0R8 195 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Adgra2Q91ZV8 1336 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pnpla7A2AJ88 1352 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Dip2bQ3UH60 1574 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Icam1P13597 537 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 IppP28575 584 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Aldh2P47738 519 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr17Q7TRM9 315 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Kxd1Q80XH1 177 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Arhgap11aQ80Y19 987 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Wdr48Q8BH57 676 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rpl9-ps1S4R1R7 191 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ccdc88aQ5SNZ0 1873 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Sult6b2B7ZWN4 290 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Kcnn4O89109 425 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Polr1cP52432 346 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Snrpd1P62315 119 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 SelpQ01102 768 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cyb5r4Q3TDX8 528 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pqlc1Q80XM9 271 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 BlmhQ8R016 455 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rpl38Q9JJI8 70 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Serpina3jD3Z451 420 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ppm1jQ149T7 507 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 AY358078Q6UY53 465 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cyp2r1Q6VVW9 501 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ssx9Q6XAS3 170 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 D3Ertd751eQ8BGN2 192 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Asb6Q91ZU1 418 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cops7aQ9CZ04 275 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Olfr600E9PUN7 314 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rad51dO55230 329 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Magea8O89012 320 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rplp2P99027 115 aaKnown RBP12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mgat3Q10470 538 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mapk10Q61831 464 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tcaf3Q6QR59 914 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Neto2Q8BNJ6 525 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Stfa2l1Q8BWM3 103 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Trmt13Q8BYH3 481 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Bloc1s5Q8R015 185 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tmem150aQ91WN2 271 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mrgpra2Q91WW4 305 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Krt81Q9ERE2 481 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 PignQ9R1S3 931 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 Clcn5Q9WVD4 746 aa12□□□□□ -0.49
Trim56-201ENSMUST00000054384 4931406B18RikA2RSL7 367 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Psmb4P99026 264 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Bcl2a1Q07440 172 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ccdc61Q3UJV1 511 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ampd1Q3V1D3 745 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mfhas1Q3V1N1 1048 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pfkfb4Q6DTY7 469 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Znf821Q6PD05 413 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gstm4Q8R5I6 218 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Bhmt2Q91WS4 363 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Kdelr1Q99JH8 212 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Akr1c12Q9JLI0 323 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tecpr2Q3UH45 1423 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ndufaf6A2AIL4 333 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 MntO08789 591 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 AurkbO70126 345 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Marcksl1P28667 200 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Htr2cP34968 459 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Bace1P56818 501 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Q3TYS2 187 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Scube3Q66PY1 993 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Enpp4Q8BTJ4 456 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pcdhgb2Q91XX7 928 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Prss40A6H6T1 365 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ica1P97411 478 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rars2Q3U186 578 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 PmlQ60953 885 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 DseQ8BLI4 958 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Galnt18Q8K1B9 622 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Pcdhb17Q91VD8 799 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Rgs18Q99PG4 235 aa11.99□□□□□ -0.49
Trim56-201ENSMUST00000054384 Med11Q9D8C6 117 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms