RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cdh1P09803 884 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cdh2P15116 906 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fubp3Q3TIX6 575 aaKnown RBP11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Xkr9Q5GH62 373 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 BegainQ68EF6 600 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1046Q7TR79 316 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dnajb13Q80Y75 316 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nup54Q8BTS4 510 aaKnown RBP11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam126bQ8C729 530 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mark4Q8CIP4 752 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Znf668Q8K2R5 619 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Smg8Q8VE18 991 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Vmp1Q99KU0 406 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Echdc3Q9D7J9 300 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Entpd5Q9WUZ9 427 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 B020011L13RikA0A087WQI7 412 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm3002E9PW72 216 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rnf169E9Q7F2 694 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 F6Y6L6 278 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 InvsO89019 1062 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sstr3P30935 428 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tgm3Q08189 693 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 KrtdapQ3V2T4 102 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfyve1Q810J8 777 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam163bQ8BUM6 167 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gfm2Q8R2Q4 779 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ifi30Q9ESY9 248 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm8267E9Q207 261 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 CrtamQ149L7 389 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tmc5Q32NZ6 967 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Kcna4Q61423 654 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Kiaa0895Q7TQE7 519 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 DseQ8BLI4 958 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pcdhb6Q91XZ4 772 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dach2Q925Q8 634 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Trim16Q99PP9 556 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Med21Q9CQ39 144 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Trip4Q9QXN3 581 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 TriqkB2B9E1 86 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Man2b1O09159 1013 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Chrna4O70174 629 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 PnpP23492 289 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cxcl12P40224 93 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lrrc8bQ5DU41 803 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfp120Q8BZW4 436 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fbxl8Q8CIG9 374 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Plbd1Q8VCI0 550 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Necab2Q91ZP9 389 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nsmce4aG3XA30 381 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 DcxO88809 366 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Bcl2a1Q07440 172 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Znf800Q0VEE6 662 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 AbrQ5SSL4 859 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 GapdhsQ64467 440 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rundc3bQ6PDC0 408 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Btbd10Q80X66 475 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 NcaldQ91X97 193 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Chst15Q91XQ5 561 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam83dQ9D7I8 585 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nufip1Q9QXX8 484 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fer1l6E0CZ42 1862 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lgals7O54974 136 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 UtyP79457 1212 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tapt1Q4VBD2 564 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 MslnQ61468 625 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr538Q7TRT5 310 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tmem202Q80W35 275 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lmo3Q8BZL8 145 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Hectd2Q8CDU6 774 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cwf19l1Q8CI33 537 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr704Q9EPF6 315 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cntn6Q9JMB8 1028 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tpst1O70281 370 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gpr25P0C5I1 358 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc7a2P18581 657 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gsta3P30115 221 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Itga7Q61738 1179 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Trappc6aQ78XR0 159 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1080Q7TR67 313 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 N4bp2l2Q8JZS6 575 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mkl1Q8K4J6 964 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Npffr2Q924H0 417 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Bbox1Q924Y0 387 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam173bQ9D1Z3 247 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 AcadsbQ9DBL1 432 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Kdelc1Q9JHP7 502 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 RecqlQ9Z129 648 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pdpk1Q9Z2A0 559 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nup98Q6PFD9 1816 aaKnown RBP11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Plch1Q4KWH5 1682 aa11.93□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1049A2ARZ0 308 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 4930402K13RikB1AW18 415 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sema3aO08665 772 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Axin1O35625 863 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Kctd8Q50H33 476 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc9b2Q5BKR2 547 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sf1Q64213 653 aaKnown RBP11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Klhl17Q6TDP3 640 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Insig1Q8BGI3 259 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Krt75Q8BGZ7 551 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms