RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Zbed5B2RPU8 756 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm6309L7N481 315 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ebf3O08791 596 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kcna3P16390 528 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Il6raP22272 460 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 UcmaQ14BU0 138 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Trmt10cQ3UFY8 414 aaKnown RBP12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Hspa1aQ61696 641 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 PolnQ7TQ07 864 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Atp2c1Q80XR2 918 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gabra5Q8BHJ7 463 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Suds3Q8BR65 328 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Clasp2Q8BRT1 1286 aaKnown RBP12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Acsl5Q8JZR0 683 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tspan33Q8R3S2 283 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tbc1d22aQ8R5A6 516 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Lysmd3Q99LE3 305 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Trim8Q99PJ2 551 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Atp6ap2Q9CYN9 350 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dnajb4Q9D832 337 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tbc1d21Q9D9D3 336 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rab13Q9DD03 202 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 HnrnpcQ9Z204 313 aaKnown RBP12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ldb2O55203 373 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Hcn3O88705 779 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 CtsdP18242 410 aaKnown RBP12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Plk2P53351 682 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 PrkczQ02956 592 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Prickle1Q3U5C7 832 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Sytl5Q80T23 753 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Alkbh8Q80Y20 664 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ttc24Q8BYG0 334 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Slc46a2Q8CA03 479 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Mark4Q8CIP4 752 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Exd2Q8VEG4 650 aaKnown RBP12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zdhhc7Q91WU6 308 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Mtfr1Q99MB2 328 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ndufa13Q9ERS2 144 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Nt5cQ9JM14 200 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Hey2Q9QUS4 339 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Spint1Q9R097 507 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 M1apQ9Z0E1 529 aa12.79□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Plin4O88492 1403 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Tmem245B1AZA5 876 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zbed6D2EAC2 980 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Kcnt2D3Z649 1135 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm20828J3KMI7 228 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rhox2gL7MUB9 191 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Bub1O08901 1058 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Acvr1P37172 509 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Timm13P62075 95 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 PrlrQ08501 608 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Dnajb14Q149L6 379 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pag1Q3U1F9 429 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zmpste24Q80W54 475 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 B430218F22RikQ8BQR5 223 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gpr21Q8BX79 349 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 NcaphQ8C156 731 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ccdc80Q8R2G6 949 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pacsin3Q99JB8 424 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Rnf111Q99ML9 989 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gtf2ird2Q99NI3 936 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Lrrc40Q9CRC8 602 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Chit1Q9D7Q1 464 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 DcpsQ9DAR7 338 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Skint1A7TZE6 364 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Galnt1O08912 559 aaKnown RBP12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cd151O35566 253 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 CcnfP51944 777 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Slc26a1P58735 704 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 ArvcfP98203 962 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Mtf2Q02395 593 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gpsm3Q3U1Z5 159 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Arhgap17Q3UIA2 846 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ccdc61Q3UJV1 511 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cntn2Q61330 1040 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Skiv2lQ6NZR5 1244 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zfp606Q7TSV0 794 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Hmgxb4Q80Y32 594 aaKnown RBP12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Slc36a3Q811P0 477 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Panx3Q8CEG0 392 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Asz1Q8VD46 475 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pmf1Q9CPV5 202 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Upk1aQ9D132 257 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Ovca2Q9D7E3 225 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pik3cgQ9JHG7 1102 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Homer2Q9QWW1 354 aa12.78□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Gm28168A0A087WNP1 180 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zmynd12A2BGJ5 363 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Vmn2r14E9Q759 848 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zbtb10E9Q8X5 861 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Hmgxb3G3X9M3 1254 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 MttpO08601 894 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Pik3cdO35904 1043 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Cd4P06332 457 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 RapsnP12672 412 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Npr1P18293 1057 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Flt3lgP49772 232 aa12.77□□□□□ -0.36
Rnf4-201ENSMUST00000030992 Zfp217Q3U0X6 1041 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms