RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 KIF24Q5T7B8 1368 aa23.94■■□□□ 1.42
PHGDH-209ENST00000641074 NFAT5O94916 1531 aa23.93■■□□□ 1.42
PHGDH-209ENST00000641074 RNF123Q5XPI4 1314 aa23.93■■□□□ 1.42
PHGDH-209ENST00000641074 E9PSI1 815 aa23.93■■□□□ 1.42
PHGDH-209ENST00000641074 LMOD2Q6P5Q4 547 aa23.93■■□□□ 1.42
PHGDH-209ENST00000641074 RCAN3Q9UKA8 241 aa23.93■■□□□ 1.42
PHGDH-209ENST00000641074 IRX6P78412 446 aaPredicted RBP23.92■■□□□ 1.42
PHGDH-209ENST00000641074 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
PHGDH-209ENST00000641074 NPHP3Q7Z494 1330 aa23.92■■□□□ 1.42
PHGDH-209ENST00000641074 HOXC9P31274 260 aa23.91■■□□□ 1.42
PHGDH-209ENST00000641074 WDR63Q8IWG1 891 aa23.91■■□□□ 1.42
PHGDH-209ENST00000641074 PHACTR3Q96KR7 559 aa23.91■■□□□ 1.42
PHGDH-209ENST00000641074 RGPD1P0DJD0 1748 aa23.91■■□□□ 1.42
PHGDH-209ENST00000641074 BRINP3Q76B58 766 aa23.91■■□□□ 1.42
PHGDH-209ENST00000641074 NEFMP07197 916 aa23.9■■□□□ 1.42
PHGDH-209ENST00000641074 SLAIN2Q9P270 581 aa23.9■■□□□ 1.42
PHGDH-209ENST00000641074 SLIT3O75094 1523 aa23.9■■□□□ 1.42
PHGDH-209ENST00000641074 ALS2Q96Q42 1657 aa23.89■■□□□ 1.42
PHGDH-209ENST00000641074 TRIM35Q9UPQ4 493 aa23.89■■□□□ 1.42
PHGDH-209ENST00000641074 USP19O94966 1318 aa23.89■■□□□ 1.41
PHGDH-209ENST00000641074 LTN1O94822 1766 aa23.88■■□□□ 1.41
PHGDH-209ENST00000641074 GCP02774 474 aa23.88■■□□□ 1.41
PHGDH-209ENST00000641074 RIPK4P57078 832 aa23.88■■□□□ 1.41
PHGDH-209ENST00000641074 SULT6B1Q6IMI4 303 aa23.88■■□□□ 1.41
PHGDH-209ENST00000641074 AEBP1Q8IUX7 1158 aa23.88■■□□□ 1.41
PHGDH-209ENST00000641074 RTL1A6NKG5 1358 aa23.88■■□□□ 1.41
PHGDH-209ENST00000641074 PXDNQ92626 1479 aa23.87■■□□□ 1.41
PHGDH-209ENST00000641074 PLEKHG5O94827 1062 aa23.86■■□□□ 1.41
PHGDH-209ENST00000641074 ARHGEF10O15013 1369 aa23.86■■□□□ 1.41
PHGDH-209ENST00000641074 NFE2L2Q16236 605 aa23.86■■□□□ 1.41
PHGDH-209ENST00000641074 IP6K1Q92551 441 aa23.85■■□□□ 1.41
PHGDH-209ENST00000641074 EYA1Q99502 592 aa23.83■■□□□ 1.41
PHGDH-209ENST00000641074 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.4
PHGDH-209ENST00000641074 IGSF1Q8N6C5 1336 aa23.83■■□□□ 1.4
PHGDH-209ENST00000641074 TNS3Q68CZ2 1445 aa23.82■■□□□ 1.4
PHGDH-209ENST00000641074 MED1Q15648 1581 aaPredicted RBP23.82■■□□□ 1.4
PHGDH-209ENST00000641074 PHRF1Q9P1Y6 1649 aaKnown RBP23.82■■□□□ 1.4
PHGDH-209ENST00000641074 ZBTB7CA1YPR0 619 aa23.81■■□□□ 1.4
PHGDH-209ENST00000641074 RRP1P56182 461 aaKnown RBP23.81■■□□□ 1.4
PHGDH-209ENST00000641074 SPATA31A3Q5VYP0 1347 aa23.81■■□□□ 1.4
PHGDH-209ENST00000641074 LTV1Q96GA3 475 aaPredicted RBP23.8■■□□□ 1.4
PHGDH-209ENST00000641074 KDRP35968 1356 aa23.8■■□□□ 1.4
PHGDH-209ENST00000641074 ERICH6BQ5W0A0 696 aa23.78■■□□□ 1.4
PHGDH-209ENST00000641074 MYH16Q9H6N6 1097 aa23.78■■□□□ 1.4
PHGDH-209ENST00000641074 IL16Q14005 1332 aa23.78■■□□□ 1.4
PHGDH-209ENST00000641074 SOS2Q07890 1332 aaPredicted RBP23.77■■□□□ 1.4
PHGDH-209ENST00000641074 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
PHGDH-209ENST00000641074 DLG5Q8TDM6 1919 aa23.75■■□□□ 1.39
PHGDH-209ENST00000641074 ZC3H6P61129 1189 aaKnown RBP23.74■■□□□ 1.39
PHGDH-209ENST00000641074 CABLES1Q8TDN4 633 aa23.74■■□□□ 1.39
PHGDH-209ENST00000641074 LMOD3Q0VAK6 560 aa23.73■■□□□ 1.39
PHGDH-209ENST00000641074 FANCIQ9NVI1 1328 aa23.73■■□□□ 1.39
PHGDH-209ENST00000641074 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
PHGDH-209ENST00000641074 THUMPD2Q9BTF0 503 aaKnown RBP23.73■■□□□ 1.39
PHGDH-209ENST00000641074 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
PHGDH-209ENST00000641074 CRYBG1Q9Y4K1 1723 aa23.71■■□□□ 1.39
PHGDH-209ENST00000641074 PLIN1O60240 522 aa23.7■■□□□ 1.39
PHGDH-209ENST00000641074 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.39
PHGDH-209ENST00000641074 NBPF4Q96M43 638 aa23.7■■□□□ 1.39
PHGDH-209ENST00000641074 NHSL1Q5SYE7 1610 aa23.7■■□□□ 1.38
PHGDH-209ENST00000641074 FAM83GA6ND36 823 aa23.7■■□□□ 1.38
PHGDH-209ENST00000641074 CALD1Q05682 793 aaKnown RBP23.7■■□□□ 1.38
PHGDH-209ENST00000641074 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
PHGDH-209ENST00000641074 MTHFSDQ2M296 383 aaKnown RBP23.69■■□□□ 1.38
PHGDH-209ENST00000641074 ANKRD24Q8TF21 1146 aa23.68■■□□□ 1.38
PHGDH-209ENST00000641074 DCTN1Q14203 1278 aa23.68■■□□□ 1.38
PHGDH-209ENST00000641074 LRRC59Q96AG4 307 aaKnown RBP23.68■■□□□ 1.38
PHGDH-209ENST00000641074 RGPD2P0DJD1 1756 aa23.67■■□□□ 1.38
PHGDH-209ENST00000641074 BCAR3O75815 825 aa23.66■■□□□ 1.38
PHGDH-209ENST00000641074 PPP4R2Q9NY27 417 aa23.66■■□□□ 1.38
PHGDH-209ENST00000641074 RGPD5Q99666 1765 aa23.66■■□□□ 1.38
PHGDH-209ENST00000641074 EXOSC9Q06265 439 aaKnown RBP23.65■■□□□ 1.38
PHGDH-209ENST00000641074 LAS1LQ9Y4W2 734 aaKnown RBP23.65■■□□□ 1.38
PHGDH-209ENST00000641074 GAS2L2Q8NHY3 880 aa23.65■■□□□ 1.38
PHGDH-209ENST00000641074 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
PHGDH-209ENST00000641074 COL18A1P39060 1754 aa23.64■■□□□ 1.38
PHGDH-209ENST00000641074 ZNF853P0CG23 659 aa23.64■■□□□ 1.37
PHGDH-209ENST00000641074 RARSP54136 660 aaKnown RBP23.63■■□□□ 1.37
PHGDH-209ENST00000641074 GNAI1P63096 354 aa23.63■■□□□ 1.37
PHGDH-209ENST00000641074 CPDO75976 1380 aa23.63■■□□□ 1.37
PHGDH-209ENST00000641074 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
PHGDH-209ENST00000641074 ERBB3P21860 1342 aa23.63■■□□□ 1.37
PHGDH-209ENST00000641074 MCM10Q7L590 875 aa23.63■■□□□ 1.37
PHGDH-209ENST00000641074 NCAPD2Q15021 1401 aa23.62■■□□□ 1.37
PHGDH-209ENST00000641074 CT47B1P0C2W7 299 aaPredicted RBP23.62■■□□□ 1.37
PHGDH-209ENST00000641074 CHRNA2Q15822 529 aa23.62■■□□□ 1.37
PHGDH-209ENST00000641074 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.62■■□□□ 1.37
PHGDH-209ENST00000641074 ROBO1Q9Y6N7 1651 aa23.62■■□□□ 1.37
PHGDH-209ENST00000641074 CFAP44Q96MT7 982 aa23.61■■□□□ 1.37
PHGDH-209ENST00000641074 C20orf194Q5TEA3 1177 aa23.6■■□□□ 1.37
PHGDH-209ENST00000641074 CAMTA1Q9Y6Y1 1673 aa23.6■■□□□ 1.37
PHGDH-209ENST00000641074 EXOC6Q8TAG9 804 aa23.6■■□□□ 1.37
PHGDH-209ENST00000641074 MBIPQ9NS73 344 aa23.6■■□□□ 1.37
PHGDH-209ENST00000641074 ABCC6O95255 1503 aa23.6■■□□□ 1.37
PHGDH-209ENST00000641074 RTF1Q92541 710 aaKnown RBP23.58■■□□□ 1.37
PHGDH-209ENST00000641074 HTATSF1O43719 755 aaKnown RBP23.57■■□□□ 1.36
PHGDH-209ENST00000641074 CRB1P82279 1406 aa23.57■■□□□ 1.36
PHGDH-209ENST00000641074 ABCA3Q99758 1704 aa23.57■■□□□ 1.36
PHGDH-209ENST00000641074 GNAT3A8MTJ3 354 aa23.56■■□□□ 1.36
PHGDH-209ENST00000641074 HAP1P54257 671 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms