RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 SHANK2Q9UPX8 1470 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
CASC19-205ENST00000641013 MVPQ14764 893 aaKnown RBP9.55□□□□□ -0.88
CASC19-205ENST00000641013 CAVIN1Q6NZI2 390 aaKnown RBP9.55□□□□□ -0.88
CASC19-205ENST00000641013 TESK2Q96S53 571 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
CASC19-205ENST00000641013 ASXL1Q8IXJ9 1541 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 FAM135AQ9P2D6 1515 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 ITSN2Q9NZM3 1697 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 SLFN14P0C7P3 912 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
CASC19-205ENST00000641013 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 TSPY26PQ9H489 355 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 BCCIPQ9P287 314 aaKnown RBP eCLIP9.54□□□□□ -0.88
CASC19-205ENST00000641013 DDX41Q9UJV9 622 aaKnown RBP9.54□□□□□ -0.88
CASC19-205ENST00000641013 CADPSQ9ULU8 1353 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 SSFA2P28290 1259 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 KCNJ4P48050 445 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 TERF2Q15554 542 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 USP25Q9UHP3 1055 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.88
CASC19-205ENST00000641013 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 GOLGA6L6A8MZA4 724 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 AMER1Q5JTC6 1135 aaPredicted RBP9.52□□□□□ -0.89
CASC19-205ENST00000641013 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 KRT222Q8N1A0 295 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 PANK1Q8TE04 598 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 ANKRD50Q9ULJ7 1429 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 RAD50Q92878 1312 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 ZKSCAN2Q63HK3 967 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 PAXIP1Q6ZW49 1069 aaPredicted RBP9.51□□□□□ -0.89
CASC19-205ENST00000641013 KIF2CQ99661 725 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 CTNNA3Q9UI47 895 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 PAXBP1Q9Y5B6 917 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 POLR3AO14802 1390 aaPredicted RBP9.51□□□□□ -0.89
CASC19-205ENST00000641013 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 WDR7Q9Y4E6 1490 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 NUCB1Q02818 461 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 SLFNL1Q499Z3 407 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
CASC19-205ENST00000641013 MCTP1Q6DN14 999 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 OCEL1Q9H607 264 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 FAM53CQ9NYF3 392 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 WDR62O43379 1518 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 CROCC2H7BZ55 1655 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 SMTNL1A8MU46 457 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 APAF1O14727 1248 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 MCM2P49736 904 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
CASC19-205ENST00000641013 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
CASC19-205ENST00000641013 DZIP1LQ8IYY4 767 aaKnown RBP9.48□□□□□ -0.89
CASC19-205ENST00000641013 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 GCC1Q96CN9 775 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 ZFP91Q96JP5 570 aaPredicted RBP9.48□□□□□ -0.89
CASC19-205ENST00000641013 BRMS1Q9HCU9 246 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 ADGRL1O94910 1474 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 PLB1Q6P1J6 1458 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 NUP155O75694 1391 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 ST18O60284 1047 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 REC8O95072 547 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 U2AF2P26368 475 aaKnown RBP eCLIP9.47□□□□□ -0.898e-7■■■□□ 17.1
CASC19-205ENST00000641013 MUM1L1Q5H9M0 696 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 ZNF397Q8NF99 534 aaPredicted RBP9.47□□□□□ -0.89
CASC19-205ENST00000641013 GPT2Q8TD30 523 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 ATP10AO60312 1499 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 MAGI2Q86UL8 1455 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 VGLL3A8MV65 326 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.9
CASC19-205ENST00000641013 PRPF40AO75400 957 aaKnown RBP9.46□□□□□ -0.9
CASC19-205ENST00000641013 KIF18AQ8NI77 898 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 RUNDC1Q96C34 613 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
CASC19-205ENST00000641013 SYCE3A1L190 88 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 IPO8O15397 1037 aaKnown RBP9.45□□□□□ -0.9
CASC19-205ENST00000641013 CDC45O75419 566 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
CASC19-205ENST00000641013 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 ARID3AQ99856 593 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 TUBB4AP04350 444 aa9.44□□□□□ -0.9
CASC19-205ENST00000641013 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
CASC19-205ENST00000641013 TEX35Q5T0J7 233 aa9.44□□□□□ -0.9
CASC19-205ENST00000641013 TMEM87AQ8NBN3 555 aa9.44□□□□□ -0.9
CASC19-205ENST00000641013 INTS4Q96HW7 963 aaKnown RBP9.44□□□□□ -0.9
CASC19-205ENST00000641013 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
CASC19-205ENST00000641013 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
CASC19-205ENST00000641013 KDM4AO75164 1064 aa9.43□□□□□ -0.9
CASC19-205ENST00000641013 RLBP1P12271 317 aa9.43□□□□□ -0.9
CASC19-205ENST00000641013 CYP2C19P33261 490 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms