RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 SHANK2Q9UPX8 1470 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
CASC19-205ENST00000641013 MVPQ14764 893 aaKnown RBP9.55□□□□□ -0.88
CASC19-205ENST00000641013 CAVIN1Q6NZI2 390 aaKnown RBP9.55□□□□□ -0.88
CASC19-205ENST00000641013 TESK2Q96S53 571 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
CASC19-205ENST00000641013 ASXL1Q8IXJ9 1541 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 FAM135AQ9P2D6 1515 aa9.55□□□□□ -0.88
CASC19-205ENST00000641013 ITSN2Q9NZM3 1697 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 SLFN14P0C7P3 912 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
CASC19-205ENST00000641013 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 TSPY26PQ9H489 355 aa9.54□□□□□ -0.88
CASC19-205ENST00000641013 BCCIPQ9P287 314 aaKnown RBP eCLIP9.54□□□□□ -0.88
CASC19-205ENST00000641013 DDX41Q9UJV9 622 aaKnown RBP9.54□□□□□ -0.88
CASC19-205ENST00000641013 CADPSQ9ULU8 1353 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 SSFA2P28290 1259 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 KCNJ4P48050 445 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 TERF2Q15554 542 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 USP25Q9UHP3 1055 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
CASC19-205ENST00000641013 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.88
CASC19-205ENST00000641013 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 GOLGA6L6A8MZA4 724 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 AMER1Q5JTC6 1135 aaPredicted RBP9.52□□□□□ -0.89
CASC19-205ENST00000641013 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 KRT222Q8N1A0 295 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 PANK1Q8TE04 598 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 ANKRD50Q9ULJ7 1429 aa9.52□□□□□ -0.89
CASC19-205ENST00000641013 RAD50Q92878 1312 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 ZKSCAN2Q63HK3 967 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 PAXIP1Q6ZW49 1069 aaPredicted RBP9.51□□□□□ -0.89
CASC19-205ENST00000641013 KIF2CQ99661 725 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 CTNNA3Q9UI47 895 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 PAXBP1Q9Y5B6 917 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 POLR3AO14802 1390 aaPredicted RBP9.51□□□□□ -0.89
CASC19-205ENST00000641013 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 WDR7Q9Y4E6 1490 aa9.51□□□□□ -0.89
CASC19-205ENST00000641013 NUCB1Q02818 461 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 SLFNL1Q499Z3 407 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
CASC19-205ENST00000641013 MCTP1Q6DN14 999 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 OCEL1Q9H607 264 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 FAM53CQ9NYF3 392 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 WDR62O43379 1518 aa9.5□□□□□ -0.89
CASC19-205ENST00000641013 CROCC2H7BZ55 1655 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 SMTNL1A8MU46 457 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 APAF1O14727 1248 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 MCM2P49736 904 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
CASC19-205ENST00000641013 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
CASC19-205ENST00000641013 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
CASC19-205ENST00000641013 DZIP1LQ8IYY4 767 aaKnown RBP9.48□□□□□ -0.89
CASC19-205ENST00000641013 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 GCC1Q96CN9 775 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 ZFP91Q96JP5 570 aaPredicted RBP9.48□□□□□ -0.89
CASC19-205ENST00000641013 BRMS1Q9HCU9 246 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
CASC19-205ENST00000641013 ADGRL1O94910 1474 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 PLB1Q6P1J6 1458 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 NUP155O75694 1391 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 ST18O60284 1047 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 REC8O95072 547 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 U2AF2P26368 475 aaKnown RBP eCLIP9.47□□□□□ -0.898e-7■■■□□ 17.1
CASC19-205ENST00000641013 MUM1L1Q5H9M0 696 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 ZNF397Q8NF99 534 aaPredicted RBP9.47□□□□□ -0.89
CASC19-205ENST00000641013 GPT2Q8TD30 523 aa9.47□□□□□ -0.89
CASC19-205ENST00000641013 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 ATP10AO60312 1499 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 MAGI2Q86UL8 1455 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 VGLL3A8MV65 326 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.9
CASC19-205ENST00000641013 PRPF40AO75400 957 aaKnown RBP9.46□□□□□ -0.9
CASC19-205ENST00000641013 KIF18AQ8NI77 898 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 RUNDC1Q96C34 613 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
CASC19-205ENST00000641013 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
CASC19-205ENST00000641013 SYCE3A1L190 88 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 IPO8O15397 1037 aaKnown RBP9.45□□□□□ -0.9
CASC19-205ENST00000641013 CDC45O75419 566 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
CASC19-205ENST00000641013 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 ARID3AQ99856 593 aa9.45□□□□□ -0.9
CASC19-205ENST00000641013 TUBB4AP04350 444 aa9.44□□□□□ -0.9
CASC19-205ENST00000641013 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
CASC19-205ENST00000641013 TEX35Q5T0J7 233 aa9.44□□□□□ -0.9
CASC19-205ENST00000641013 TMEM87AQ8NBN3 555 aa9.44□□□□□ -0.9
CASC19-205ENST00000641013 INTS4Q96HW7 963 aaKnown RBP9.44□□□□□ -0.9
CASC19-205ENST00000641013 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
CASC19-205ENST00000641013 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
CASC19-205ENST00000641013 KDM4AO75164 1064 aa9.43□□□□□ -0.9
CASC19-205ENST00000641013 RLBP1P12271 317 aa9.43□□□□□ -0.9
CASC19-205ENST00000641013 CYP2C19P33261 490 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms