RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
KCNMA1-293ENST00000640969 IL27Q8NEV9 243 aa23.37■■□□□ 1.33
KCNMA1-293ENST00000640969 SCAPERQ9BY12 1400 aa23.37■■□□□ 1.33
KCNMA1-293ENST00000640969 TANGO6Q9C0B7 1094 aa23.36■■□□□ 1.33
KCNMA1-293ENST00000640969 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
KCNMA1-293ENST00000640969 LARP1BQ659C4 914 aaKnown RBP23.36■■□□□ 1.33
KCNMA1-293ENST00000640969 WWC2Q6AWC2 1192 aa23.36■■□□□ 1.33
KCNMA1-293ENST00000640969 PLCD4Q9BRC7 762 aa23.36■■□□□ 1.33
KCNMA1-293ENST00000640969 CBFA2T2O43439 604 aa23.35■■□□□ 1.33
KCNMA1-293ENST00000640969 LUC7LQ9NQ29 371 aaKnown RBP23.35■■□□□ 1.33
KCNMA1-293ENST00000640969 FAM177A1Q8N128 213 aaPredicted RBP23.35■■□□□ 1.33
KCNMA1-293ENST00000640969 BACH2Q9BYV9 841 aa23.35■■□□□ 1.33
KCNMA1-293ENST00000640969 LRRC9Q6ZRR7 1453 aa23.35■■□□□ 1.33
KCNMA1-293ENST00000640969 NACAP1Q9BZK3 213 aa23.34■■□□□ 1.33
KCNMA1-293ENST00000640969 ZHX3Q9H4I2 956 aa23.34■■□□□ 1.33
KCNMA1-293ENST00000640969 ATP2B2Q01814 1243 aa23.34■■□□□ 1.33
KCNMA1-293ENST00000640969 PDCL3Q9H2J4 239 aa23.33■■□□□ 1.33
KCNMA1-293ENST00000640969 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.33
KCNMA1-293ENST00000640969 UQCRHLA0A096LP55 91 aa23.33■■□□□ 1.33
KCNMA1-293ENST00000640969 UQCRHP07919 91 aa23.33■■□□□ 1.33
KCNMA1-293ENST00000640969 ERLIN1O75477 346 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 NUP133Q8WUM0 1156 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 ZNF428Q96B54 188 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 SRCIN1Q9C0H9 1055 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 KIAA0754O94854 1291 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 CHD1LQ86WJ1 897 aa23.33■■□□□ 1.32
KCNMA1-293ENST00000640969 SPATA32Q96LK8 384 aa23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 TXLNBQ8N3L3 684 aa23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 MVPQ14764 893 aaKnown RBP23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 PAF1Q8N7H5 531 aa23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 PDRG1Q9NUG6 133 aa23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 ZRSR2Q15696 482 aaKnown RBP23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 NCOA2Q15596 1464 aa23.32■■□□□ 1.32
KCNMA1-293ENST00000640969 FAM69CQ0P6D2 419 aa23.31■■□□□ 1.32
KCNMA1-293ENST00000640969 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
KCNMA1-293ENST00000640969 SEPT7Q16181 437 aaKnown RBP23.31■■□□□ 1.32
KCNMA1-293ENST00000640969 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
KCNMA1-293ENST00000640969 TATP17735 454 aaPredicted RBP23.3■■□□□ 1.32
KCNMA1-293ENST00000640969 HSP90AB3PQ58FF7 597 aa23.3■■□□□ 1.32
KCNMA1-293ENST00000640969 NOL7Q9UMY1 257 aaKnown RBP23.3■■□□□ 1.32
KCNMA1-293ENST00000640969 ANKRD62A6NC57 917 aa23.3■■□□□ 1.32
KCNMA1-293ENST00000640969 EIF3JO75822 258 aaKnown RBP23.3■■□□□ 1.32
KCNMA1-293ENST00000640969 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
KCNMA1-293ENST00000640969 ARHGAP5Q13017 1502 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 AACSQ86V21 672 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 ENOX2Q16206 610 aaKnown RBP23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 SOGA3Q5TF21 947 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 BLOC1S2Q6QNY1 142 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 KIF21BO75037 1637 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
KCNMA1-293ENST00000640969 FGD5Q6ZNL6 1462 aa23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 IGF1RP08069 1367 aa23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 FAM193AP78312 1265 aa23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 JAKMIP1Q96N16 626 aaKnown RBP23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 NUP62CLQ9H1M0 184 aa23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 CENPHQ9H3R5 247 aa23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 ZSCAN25Q6NSZ9 544 aa23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 PNISRQ8TF01 805 aaKnown RBP23.28■■□□□ 1.32
KCNMA1-293ENST00000640969 CABP4P57796 275 aa23.27■■□□□ 1.32
KCNMA1-293ENST00000640969 CEP57L1Q8IYX8 460 aa23.27■■□□□ 1.32
KCNMA1-293ENST00000640969 ZSCAN31Q96LW9 406 aaPredicted RBP23.27■■□□□ 1.32
KCNMA1-293ENST00000640969 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
KCNMA1-293ENST00000640969 STRN4Q9NRL3 753 aa23.27■■□□□ 1.32
KCNMA1-293ENST00000640969 CDKL5O76039 1030 aa23.26■■□□□ 1.31
KCNMA1-293ENST00000640969 ANKRD18AQ8IVF6 992 aa23.26■■□□□ 1.31
KCNMA1-293ENST00000640969 MYL6BP14649 208 aa23.26■■□□□ 1.31
KCNMA1-293ENST00000640969 FKBP4Q02790 459 aaKnown RBP eCLIP23.26■■□□□ 1.31
KCNMA1-293ENST00000640969 CWC27Q6UX04 472 aaKnown RBP23.26■■□□□ 1.31
KCNMA1-293ENST00000640969 CFAP45Q9UL16 551 aa23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 GOLGA6L7A0A1B0GV03 622 aa23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 CCDC57Q2TAC2 916 aa23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 TAX1BP1Q86VP1 789 aa23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 UPF3BQ9BZI7 483 aaKnown RBP23.25■■□□□ 1.31
KCNMA1-293ENST00000640969 IQCEQ6IPM2 695 aa23.24■■□□□ 1.31
KCNMA1-293ENST00000640969 CDK19Q9BWU1 502 aa23.24■■□□□ 1.31
KCNMA1-293ENST00000640969 SEPT11Q9NVA2 429 aaKnown RBP23.24■■□□□ 1.31
KCNMA1-293ENST00000640969 CIZ1Q9ULV3 898 aaPredicted RBP23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 MCM4P33991 863 aa23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 TXNDC2Q86VQ3 553 aa23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 SRGAP3O43295 1099 aa23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
KCNMA1-293ENST00000640969 FILIP1Q7Z7B0 1213 aa23.22■■□□□ 1.31
KCNMA1-293ENST00000640969 SMTNL1A8MU46 457 aa23.21■■□□□ 1.31
KCNMA1-293ENST00000640969 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
KCNMA1-293ENST00000640969 SSBP05455 408 aaKnown RBP eCLIP23.21■■□□□ 1.31
KCNMA1-293ENST00000640969 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
KCNMA1-293ENST00000640969 MPHOSPH8Q99549 860 aa23.2■■□□□ 1.31
KCNMA1-293ENST00000640969 CTNNA3Q9UI47 895 aa23.2■■□□□ 1.31
KCNMA1-293ENST00000640969 LRRFIP2Q9Y608 721 aaKnown RBP23.2■■□□□ 1.3
KCNMA1-293ENST00000640969 TDO2P48775 406 aa23.2■■□□□ 1.3
KCNMA1-293ENST00000640969 UBAC1Q9BSL1 405 aa23.2■■□□□ 1.3
KCNMA1-293ENST00000640969 IL1RAPL2Q9NP60 686 aa23.2■■□□□ 1.3
KCNMA1-293ENST00000640969 CCDC102AQ96A19 550 aa23.2■■□□□ 1.3
KCNMA1-293ENST00000640969 DHX37Q8IY37 1157 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms