RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 ZNF772Q68DY9 489 aaPredicted RBP7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 HDGFL2Q7Z4V5 671 aaPredicted RBP7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 NUTM2AQ8IVF1 878 aaPredicted RBP7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 RGPD2P0DJD1 1756 aa7.96□□□□□ -1.13
PRICKLE1-220ENST00000640840 GCP02774 474 aa7.96□□□□□ -1.14
PRICKLE1-220ENST00000640840 NLRP13Q86W25 1043 aa7.96□□□□□ -1.14
PRICKLE1-220ENST00000640840 RGS12O14924 1447 aa7.96□□□□□ -1.14
PRICKLE1-220ENST00000640840 NME9Q86XW9 330 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 SHANK3Q9BYB0 1731 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 LRRC37A3O60309 1634 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 FYB1O15117 783 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 RGPD1P0DJD0 1748 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 PAK3O75914 559 aaPredicted RBP7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 IRX6P78412 446 aaPredicted RBP7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 ARHGEF25Q86VW2 580 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 C8orf37Q96NL8 207 aa7.95□□□□□ -1.14
PRICKLE1-220ENST00000640840 PER1O15534 1290 aaPredicted RBP7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 ADAMTS2O95450 1211 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 UNC5CLQ8IV45 518 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 VPS72Q15906 364 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 UBE2Q2Q8WVN8 375 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 TAOK2Q9UL54 1235 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 NCAPD2Q15021 1401 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 NSD2O96028 1365 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 EP400Q96L91 3159 aa7.94□□□□□ -1.14
PRICKLE1-220ENST00000640840 NPC1L1Q9UHC9 1359 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 NUTM2GQ5VZR2 741 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 KCNH5Q8NCM2 988 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 PODXL2Q9NZ53 605 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 NLRP6P59044 892 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 NBR1Q14596 966 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 MEX3CQ5U5Q3 659 aaKnown RBP7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 USP21Q9UK80 565 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 BLMP54132 1417 aaPredicted RBP7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 RTL1A6NKG5 1358 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 KIF24Q5T7B8 1368 aa7.93□□□□□ -1.14
PRICKLE1-220ENST00000640840 DISP2A7MBM2 1401 aa7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 SPATA31A5Q5VU36 1347 aa7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 SPATA31A7Q8IWB4 1347 aa7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 NGLY1Q96IV0 654 aa7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 TRPC5Q9UL62 973 aaPredicted RBP7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 NEFLP07196 543 aa7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.92□□□□□ -1.14
PRICKLE1-220ENST00000640840 PANK3Q9H999 370 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 SBF2Q86WG5 1849 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 PKD1L3Q7Z443 1732 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 TNS1Q9HBL0 1735 aaKnown RBP7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 CRB1P82279 1406 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 GJD4Q96KN9 370 aaPredicted RBP7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 SPATA31A1Q5TZJ5 1347 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 RBM6P78332 1123 aaKnown RBP7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 BTG4Q9NY30 223 aa7.91□□□□□ -1.14
PRICKLE1-220ENST00000640840 FANCIQ9NVI1 1328 aa7.9□□□□□ -1.15
PRICKLE1-220ENST00000640840 ZC3H6P61129 1189 aaKnown RBP7.9□□□□□ -1.15
PRICKLE1-220ENST00000640840 DDX10Q13206 875 aaKnown RBP7.9□□□□□ -1.15
PRICKLE1-220ENST00000640840 IL27Q8NEV9 243 aa7.9□□□□□ -1.15
PRICKLE1-220ENST00000640840 CGNL1Q0VF96 1302 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 COL3A1P02461 1466 aaPredicted RBP7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 RXRBP28702 533 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 CHRNA2Q15822 529 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 MAP3K19Q56UN5 1328 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 RGPD3A6NKT7 1758 aaPredicted RBP7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 RGPD4Q7Z3J3 1758 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 COG3Q96JB2 828 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 WDR17Q8IZU2 1322 aa7.89□□□□□ -1.15
PRICKLE1-220ENST00000640840 IP6K1Q92551 441 aa7.88□□□□□ -1.15
PRICKLE1-220ENST00000640840 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
PRICKLE1-220ENST00000640840 ERBB3P21860 1342 aa7.88□□□□□ -1.15
PRICKLE1-220ENST00000640840 INSRP06213 1382 aa7.88□□□□□ -1.15
PRICKLE1-220ENST00000640840 THRAP3Q9Y2W1 955 aaKnown RBP7.88□□□□□ -1.15
PRICKLE1-220ENST00000640840 BCL9O00512 1426 aa7.87□□□□□ -1.15
PRICKLE1-220ENST00000640840 HOXC9P31274 260 aa7.87□□□□□ -1.15
PRICKLE1-220ENST00000640840 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
PRICKLE1-220ENST00000640840 FBLN1P23142 703 aa7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 HAP1P54257 671 aaPredicted RBP7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 FLT4P35916 1363 aa7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 PLEKHG2Q9H7P9 1386 aa7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 NHSQ6T4R5 1651 aa7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 CARD10Q9BWT7 1032 aa7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 POLKQ9UBT6 870 aa7.86□□□□□ -1.15
PRICKLE1-220ENST00000640840 RREB1Q92766 1687 aa7.85□□□□□ -1.15
PRICKLE1-220ENST00000640840 ADAMTS7Q9UKP4 1686 aa7.85□□□□□ -1.15
PRICKLE1-220ENST00000640840 TNS2Q63HR2 1409 aa7.85□□□□□ -1.15
PRICKLE1-220ENST00000640840 VIRMAQ69YN4 1812 aaKnown RBP7.85□□□□□ -1.15
PRICKLE1-220ENST00000640840 TOGARAM1Q9Y4F4 1720 aa7.85□□□□□ -1.15
PRICKLE1-220ENST00000640840 SOCS7O14512 581 aa7.85□□□□□ -1.15
PRICKLE1-220ENST00000640840 PARD3Q8TEW0 1356 aa7.84□□□□□ -1.15
PRICKLE1-220ENST00000640840 RRS1Q15050 365 aaKnown RBP7.84□□□□□ -1.15
PRICKLE1-220ENST00000640840 TCP11L2Q8N4U5 519 aa7.84□□□□□ -1.15
PRICKLE1-220ENST00000640840 MEGF6O75095 1541 aa7.84□□□□□ -1.16
PRICKLE1-220ENST00000640840 ANKRD24Q8TF21 1146 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms