RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 RTN4Q9NQC3 1192 aaKnown RBP17.68■□□□□ 0.42
GFAP-237ENST00000640552 TTC21BQ7Z4L5 1316 aa17.68■□□□□ 0.42
GFAP-237ENST00000640552 TMEM131LA2VDJ0 1609 aa17.68■□□□□ 0.42
GFAP-237ENST00000640552 BECN1Q14457 450 aa17.67■□□□□ 0.42
GFAP-237ENST00000640552 NFKBIBQ15653 356 aa17.67■□□□□ 0.42
GFAP-237ENST00000640552 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
GFAP-237ENST00000640552 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
GFAP-237ENST00000640552 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
GFAP-237ENST00000640552 FRAT2O75474 233 aaPredicted RBP17.66■□□□□ 0.42
GFAP-237ENST00000640552 VAMP4O75379 141 aa17.65■□□□□ 0.42
GFAP-237ENST00000640552 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
GFAP-237ENST00000640552 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
GFAP-237ENST00000640552 DIP2BQ9P265 1576 aa17.65■□□□□ 0.42
GFAP-237ENST00000640552 ZNF428Q96B54 188 aa17.65■□□□□ 0.42
GFAP-237ENST00000640552 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
GFAP-237ENST00000640552 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
GFAP-237ENST00000640552 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
GFAP-237ENST00000640552 ARHGEF40Q8TER5 1519 aa17.64■□□□□ 0.41
GFAP-237ENST00000640552 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
GFAP-237ENST00000640552 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
GFAP-237ENST00000640552 KCNA6P17658 529 aa17.62■□□□□ 0.41
GFAP-237ENST00000640552 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
GFAP-237ENST00000640552 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
GFAP-237ENST00000640552 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
GFAP-237ENST00000640552 F6X3S4 739 aa17.6■□□□□ 0.41
GFAP-237ENST00000640552 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
GFAP-237ENST00000640552 ZBTB40Q9NUA8 1239 aa17.6■□□□□ 0.41
GFAP-237ENST00000640552 IQSEC2Q5JU85 1478 aa17.6■□□□□ 0.41
GFAP-237ENST00000640552 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
GFAP-237ENST00000640552 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
GFAP-237ENST00000640552 SHPRHQ149N8 1683 aa17.59■□□□□ 0.41
GFAP-237ENST00000640552 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
GFAP-237ENST00000640552 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
GFAP-237ENST00000640552 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
GFAP-237ENST00000640552 IL16Q14005 1332 aa17.58■□□□□ 0.41
GFAP-237ENST00000640552 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.41
GFAP-237ENST00000640552 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
GFAP-237ENST00000640552 CHD1LQ86WJ1 897 aa17.57■□□□□ 0.4
GFAP-237ENST00000640552 PSME1Q06323 249 aa17.56■□□□□ 0.4
GFAP-237ENST00000640552 ALDH1L2Q3SY69 923 aa17.56■□□□□ 0.4
GFAP-237ENST00000640552 GZF1Q9H116 711 aaPredicted RBP17.56■□□□□ 0.4
GFAP-237ENST00000640552 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
GFAP-237ENST00000640552 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
GFAP-237ENST00000640552 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
GFAP-237ENST00000640552 CPS1P31327 1500 aa17.55■□□□□ 0.4
GFAP-237ENST00000640552 AAMPQ13685 434 aa17.54■□□□□ 0.4
GFAP-237ENST00000640552 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
GFAP-237ENST00000640552 FKBP5Q13451 457 aaPredicted RBP17.54■□□□□ 0.4
GFAP-237ENST00000640552 LRRC7Q96NW7 1537 aa17.54■□□□□ 0.4
GFAP-237ENST00000640552 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
GFAP-237ENST00000640552 EYA1Q99502 592 aa17.53■□□□□ 0.4
GFAP-237ENST00000640552 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
GFAP-237ENST00000640552 NLRP1Q9C000 1473 aa17.53■□□□□ 0.4
GFAP-237ENST00000640552 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
GFAP-237ENST00000640552 USP19O94966 1318 aa17.52■□□□□ 0.39
GFAP-237ENST00000640552 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
GFAP-237ENST00000640552 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
GFAP-237ENST00000640552 G2E3Q7L622 706 aa17.51■□□□□ 0.39
GFAP-237ENST00000640552 ATP7BP35670 1465 aa17.51■□□□□ 0.39
GFAP-237ENST00000640552 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
GFAP-237ENST00000640552 FAM135BQ49AJ0 1406 aa17.51■□□□□ 0.39
GFAP-237ENST00000640552 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
GFAP-237ENST00000640552 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
GFAP-237ENST00000640552 MEIS3Q99687 375 aa17.5■□□□□ 0.39
GFAP-237ENST00000640552 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
GFAP-237ENST00000640552 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
GFAP-237ENST00000640552 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
GFAP-237ENST00000640552 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
GFAP-237ENST00000640552 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
GFAP-237ENST00000640552 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
GFAP-237ENST00000640552 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
GFAP-237ENST00000640552 NUCB1Q02818 461 aa17.48■□□□□ 0.39
GFAP-237ENST00000640552 PLEKHG3A1L390 1219 aa17.48■□□□□ 0.39
GFAP-237ENST00000640552 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
GFAP-237ENST00000640552 ANXA1P04083 346 aa17.47■□□□□ 0.39
GFAP-237ENST00000640552 GSE1Q14687 1217 aa17.47■□□□□ 0.39
GFAP-237ENST00000640552 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
GFAP-237ENST00000640552 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
GFAP-237ENST00000640552 TBX22Q9Y458 520 aa17.46■□□□□ 0.39
GFAP-237ENST00000640552 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.39
GFAP-237ENST00000640552 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
GFAP-237ENST00000640552 PHF8Q9UPP1 1060 aa17.46■□□□□ 0.39
GFAP-237ENST00000640552 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
GFAP-237ENST00000640552 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
GFAP-237ENST00000640552 AGLP35573 1532 aa17.45■□□□□ 0.38
GFAP-237ENST00000640552 ADAMTS13Q76LX8 1427 aa17.45■□□□□ 0.38
GFAP-237ENST00000640552 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
GFAP-237ENST00000640552 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
GFAP-237ENST00000640552 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
GFAP-237ENST00000640552 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
GFAP-237ENST00000640552 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
GFAP-237ENST00000640552 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
GFAP-237ENST00000640552 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
GFAP-237ENST00000640552 USP6P35125 1406 aa17.43■□□□□ 0.38
GFAP-237ENST00000640552 PTPRUQ92729 1446 aa17.43■□□□□ 0.38
GFAP-237ENST00000640552 CHL1O00533 1208 aa17.43■□□□□ 0.38
GFAP-237ENST00000640552 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
GFAP-237ENST00000640552 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
GFAP-237ENST00000640552 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
GFAP-237ENST00000640552 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms