RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ERFEQ4G0M1 354 aa6.77□□□□□ -1.33
ATM-230ENST00000640388 ADAM32Q8TC27 787 aa6.77□□□□□ -1.33
ATM-230ENST00000640388 OCSTAMPQ9BR26 566 aa6.77□□□□□ -1.33
ATM-230ENST00000640388 NXF1Q9UBU9 619 aaKnown RBP6.77□□□□□ -1.33
ATM-230ENST00000640388 ZBBXA8MT70 800 aa6.76□□□□□ -1.33
ATM-230ENST00000640388 ABL2P42684 1182 aa6.76□□□□□ -1.33
ATM-230ENST00000640388 SLC16A10Q8TF71 515 aa6.76□□□□□ -1.33
ATM-230ENST00000640388 C1QTNF2Q9BXJ5 285 aa6.76□□□□□ -1.33
ATM-230ENST00000640388 FBXO45P0C2W1 286 aa6.75□□□□□ -1.33
ATM-230ENST00000640388 BMP1P13497 986 aa6.75□□□□□ -1.33
ATM-230ENST00000640388 UBTFP17480 764 aaKnown RBP6.75□□□□□ -1.33
ATM-230ENST00000640388 TRMT44Q8IYL2 757 aaKnown RBP6.75□□□□□ -1.33
ATM-230ENST00000640388 CDK15Q96Q40 435 aa6.75□□□□□ -1.33
ATM-230ENST00000640388 COG6Q9Y2V7 657 aa6.75□□□□□ -1.33
ATM-230ENST00000640388 RAD21O60216 631 aa6.74□□□□□ -1.33
ATM-230ENST00000640388 VASH1Q7L8A9 365 aaPredicted RBP6.74□□□□□ -1.33
ATM-230ENST00000640388 DZIP3Q86Y13 1208 aaKnown RBP6.74□□□□□ -1.33
ATM-230ENST00000640388 SLC10A4Q96EP9 437 aa6.74□□□□□ -1.33
ATM-230ENST00000640388 POM121Q96HA1 1249 aa6.74□□□□□ -1.33
ATM-230ENST00000640388 ADH1CP00326 375 aa6.73□□□□□ -1.33
ATM-230ENST00000640388 NR1H3Q13133 447 aa6.73□□□□□ -1.33
ATM-230ENST00000640388 IRF5Q13568 498 aa6.73□□□□□ -1.33
ATM-230ENST00000640388 IRF7Q92985 503 aa6.73□□□□□ -1.33
ATM-230ENST00000640388 H3BM21 787 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 TIMP2P16035 220 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 GRM5P41594 1212 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 NNTQ13423 1086 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 KLF16Q9BXK1 252 aaPredicted RBP6.72□□□□□ -1.33
ATM-230ENST00000640388 MAP4K5Q9Y4K4 846 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 PCDHB9Q9Y5E1 797 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 GTF3C3Q9Y5Q9 886 aa6.72□□□□□ -1.33
ATM-230ENST00000640388 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
ATM-230ENST00000640388 FSHRP23945 695 aa6.71□□□□□ -1.34
ATM-230ENST00000640388 VAC14Q08AM6 782 aa6.71□□□□□ -1.34
ATM-230ENST00000640388 ZFP42Q96MM3 310 aa6.71□□□□□ -1.34
ATM-230ENST00000640388 KCTD15Q96SI1 283 aaPredicted RBP6.71□□□□□ -1.34
ATM-230ENST00000640388 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.34
ATM-230ENST00000640388 ZNF330Q9Y3S2 320 aaPredicted RBP6.71□□□□□ -1.34
ATM-230ENST00000640388 NR3C2P08235 984 aa6.7□□□□□ -1.34
ATM-230ENST00000640388 VSIG8P0DPA2 414 aa6.7□□□□□ -1.34
ATM-230ENST00000640388 NR5A1Q13285 461 aa6.7□□□□□ -1.34
ATM-230ENST00000640388 MRPL14Q6P1L8 145 aaKnown RBP6.7□□□□□ -1.34
ATM-230ENST00000640388 CLUAP1Q96AJ1 413 aa6.7□□□□□ -1.34
ATM-230ENST00000640388 FAM181BA6NEQ2 426 aa6.69□□□□□ -1.34
ATM-230ENST00000640388 GMPRP36959 345 aa6.69□□□□□ -1.34
ATM-230ENST00000640388 RAB15P59190 212 aa6.69□□□□□ -1.34
ATM-230ENST00000640388 WASHC4Q2M389 1173 aa6.69□□□□□ -1.34
ATM-230ENST00000640388 NBPF20Q3BBV1 942 aa6.69□□□□□ -1.34
ATM-230ENST00000640388 WDR4P57081 412 aaKnown RBP6.68□□□□□ -1.34
ATM-230ENST00000640388 EIF4G2P78344 907 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATM-230ENST00000640388 SCARF1Q14162 830 aa6.68□□□□□ -1.34
ATM-230ENST00000640388 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
ATM-230ENST00000640388 GIGYF1O75420 1035 aaPredicted RBP6.67□□□□□ -1.34
ATM-230ENST00000640388 MCCD1P59942 119 aaPredicted RBP6.67□□□□□ -1.34
ATM-230ENST00000640388 CCDC116Q8IYX3 515 aa6.67□□□□□ -1.34
ATM-230ENST00000640388 ZSCAN1Q8NBB4 408 aa6.67□□□□□ -1.34
ATM-230ENST00000640388 ZNF592Q92610 1267 aa6.67□□□□□ -1.34
ATM-230ENST00000640388 ZIC2O95409 532 aaPredicted RBP6.66□□□□□ -1.34
ATM-230ENST00000640388 INTS6LQ5JSJ4 861 aaKnown RBP6.66□□□□□ -1.34
ATM-230ENST00000640388 ITPKCQ96DU7 683 aa6.66□□□□□ -1.34
ATM-230ENST00000640388 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
ATM-230ENST00000640388 ESPNB1AK53 854 aa6.65□□□□□ -1.34
ATM-230ENST00000640388 PPP1R26Q5T8A7 1209 aaPredicted RBP6.65□□□□□ -1.34
ATM-230ENST00000640388 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.34
ATM-230ENST00000640388 EMILIN1Q9Y6C2 1016 aa6.65□□□□□ -1.34
ATM-230ENST00000640388 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
ATM-230ENST00000640388 DHX9Q08211 1270 aaKnown RBP6.64□□□□□ -1.35
ATM-230ENST00000640388 SEMA3FQ13275 785 aa6.64□□□□□ -1.35
ATM-230ENST00000640388 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
ATM-230ENST00000640388 PURBQ96QR8 312 aaKnown RBP6.64□□□□□ -1.35
ATM-230ENST00000640388 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
ATM-230ENST00000640388 TMPRSS4Q9NRS4 437 aa6.64□□□□□ -1.35
ATM-230ENST00000640388 CEP126Q9P2H0 1117 aa6.64□□□□□ -1.35
ATM-230ENST00000640388 A6NJR5 290 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 POM121CA8CG34 1229 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 RNF20Q5VTR2 975 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 SEPT12Q8IYM1 358 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 MEIOBQ8N635 442 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 PGPEP1Q9NXJ5 209 aa6.63□□□□□ -1.35
ATM-230ENST00000640388 VEGFBP49765 207 aa6.62□□□□□ -1.35
ATM-230ENST00000640388 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
ATM-230ENST00000640388 SOX11P35716 441 aa6.61□□□□□ -1.35
ATM-230ENST00000640388 SLFNL1Q499Z3 407 aa6.61□□□□□ -1.35
ATM-230ENST00000640388 ZNF784Q8NCA9 323 aaPredicted RBP6.61□□□□□ -1.35
ATM-230ENST00000640388 CBLBQ13191 982 aa6.6□□□□□ -1.35
ATM-230ENST00000640388 HDGFL1Q5TGJ6 251 aa6.6□□□□□ -1.35
ATM-230ENST00000640388 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
ATM-230ENST00000640388 ALG2Q9H553 416 aa6.6□□□□□ -1.35
ATM-230ENST00000640388 TSGA10IPQ3SY00 556 aa6.59□□□□□ -1.35
ATM-230ENST00000640388 CCDC125Q86Z20 511 aa6.59□□□□□ -1.35
ATM-230ENST00000640388 RNF135Q8IUD6 432 aa6.59□□□□□ -1.35
ATM-230ENST00000640388 CYLDQ9NQC7 956 aa6.59□□□□□ -1.35
ATM-230ENST00000640388 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
ATM-230ENST00000640388 SOS2Q07890 1332 aaPredicted RBP6.58□□□□□ -1.36
ATM-230ENST00000640388 SOBPA7XYQ1 873 aa6.58□□□□□ -1.36
ATM-230ENST00000640388 MAN1A2O60476 641 aa6.58□□□□□ -1.36
ATM-230ENST00000640388 PHTF2Q8N3S3 785 aa6.58□□□□□ -1.36
ATM-230ENST00000640388 ADAMTS19Q8TE59 1207 aa6.58□□□□□ -1.36
ATM-230ENST00000640388 CCDC85AQ96PX6 553 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms