RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	KIF18A	Q8NI77	898 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	USP19	O94966	1318 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	GCC2	Q8IWJ2	1684 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	CCDC183	Q5T5S1	534 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	WWC1	Q8IX03	1113 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	RDX	P35241	583 aa	Known RBP	13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	CCDC191	Q8NCU4	936 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	WDR33	Q9C0J8	1336 aa	Known RBP	13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	TNN	Q9UQP3	1299 aa		13.54	□□□□□ -0.24
SPIN3-231	ENST00000639895	TTLL5	Q6EMB2	1281 aa		13.54	□□□□□ -0.24
SPIN3-231	ENST00000639895	TBC1D9	Q6ZT07	1266 aa		13.54	□□□□□ -0.24
SPIN3-231	ENST00000639895	NOB1	Q9ULX3	412 aa	Known RBP	13.54	□□□□□ -0.24
SPIN3-231	ENST00000639895	TMEM51	Q9NW97	253 aa		13.54	□□□□□ -0.24
SPIN3-231	ENST00000639895	TEX14	Q8IWB6	1497 aa		13.54	□□□□□ -0.24
SPIN3-231	ENST00000639895	IRX5	P78411	483 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	UVSSA	Q2YD98	709 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	FAM177A1	Q8N128	213 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	KIF14	Q15058	1648 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	HMMR	O75330	724 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	CEP135	Q66GS9	1140 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	PAXBP1	Q9Y5B6	917 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	CCDC141	Q6ZP82	1450 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	DNMT1	P26358	1616 aa	Known RBP	13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	IBSP	P21815	317 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	ATF7IP	Q6VMQ6	1270 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	ZNF397	Q8NF99	534 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	KIAA0556	O60303	1618 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	CCDC186	Q7Z3E2	898 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	TXLNB	Q8N3L3	684 aa		13.53	□□□□□ -0.24
SPIN3-231	ENST00000639895	CLGN	O14967	610 aa		13.52	□□□□□ -0.24
SPIN3-231	ENST00000639895	HSP90B1	P14625	803 aa	Known RBP	13.52	□□□□□ -0.24
SPIN3-231	ENST00000639895	MCM2	P49736	904 aa		13.52	□□□□□ -0.24
SPIN3-231	ENST00000639895	SLC4A10	Q6U841	1118 aa		13.52	□□□□□ -0.24
SPIN3-231	ENST00000639895	CAMK4	Q16566	473 aa		13.52	□□□□□ -0.25
SPIN3-231	ENST00000639895	GGT6	Q6P531	493 aa		13.52	□□□□□ -0.25
SPIN3-231	ENST00000639895	BRD2	P25440	801 aa	Known RBP	13.52	□□□□□ -0.25
SPIN3-231	ENST00000639895	RALGAPB	Q86X10	1494 aa		13.52	□□□□□ -0.25
SPIN3-231	ENST00000639895	GIMAP6	Q6P9H5	292 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	ZGPAT	Q8N5A5	531 aa	Known RBP	13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	ZNF526	Q8TF50	670 aa	Predicted RBP	13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	DRC1	Q96MC2	740 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	TMEM63C	Q9P1W3	806 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	PLEKHH2	Q8IVE3	1493 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	ITSN2	Q9NZM3	1697 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	ERBIN	Q96RT1	1412 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	RLBP1	P12271	317 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	CTR9	Q6PD62	1173 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	GCC1	Q96CN9	775 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	TMEM57	Q8N5G2	664 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	TNMD	Q9H2S6	317 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	LMBRD1	Q9NUN5	540 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	LRRFIP2	Q9Y608	721 aa	Known RBP	13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	PZP	P20742	1482 aa		13.51	□□□□□ -0.25
SPIN3-231	ENST00000639895	RNF20	Q5VTR2	975 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	NOC3L	Q8WTT2	800 aa	Known RBP	13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	PLEKHH1	Q9ULM0	1364 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	PTGS1	P23219	599 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	KRBA2	Q6ZNG9	492 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	FMNL2	Q96PY5	1086 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	SMTNL1	A8MU46	457 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	BANK1	Q8NDB2	785 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	MNAT1	P51948	309 aa		13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	UPF3B	Q9BZI7	483 aa	Known RBP	13.5	□□□□□ -0.25
SPIN3-231	ENST00000639895	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.49	□□□□□ -0.25
SPIN3-231	ENST00000639895	CLIP2	Q9UDT6	1046 aa		13.49	□□□□□ -0.25
SPIN3-231	ENST00000639895	BMP2KL	Q5H9B9	411 aa		13.49	□□□□□ -0.25
SPIN3-231	ENST00000639895	GIMAP7	Q8NHV1	300 aa		13.49	□□□□□ -0.25
SPIN3-231	ENST00000639895	USP8	P40818	1118 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	KLHL34	Q8N239	644 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	NUP62CL	Q9H1M0	184 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	KDM6B	O15054	1643 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895		H3BQV1	296 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	SMC2	O95347	1197 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	TTC31	Q49AM3	519 aa	Predicted RBP	13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	IFFO2	Q5TF58	517 aa		13.48	□□□□□ -0.25
SPIN3-231	ENST00000639895	PBRM1	Q86U86	1689 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	ERC2	O15083	957 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	TDO2	P48775	406 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	SF3A1	Q15459	793 aa	Known RBP	13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	CKAP2L	Q8IYA6	745 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	TRAK1	Q9UPV9	953 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	MAP3K11	Q16584	847 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	CHAMP1	Q96JM3	812 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	ACBD3	Q9H3P7	528 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	ESF1	Q9H501	851 aa	Known RBP	13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	DISP1	Q96F81	1524 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	URI1	O94763	535 aa	Predicted RBP	13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	CCDC102A	Q96A19	550 aa		13.47	□□□□□ -0.25
SPIN3-231	ENST00000639895	DNAAF4	Q8WXU2	420 aa		13.46	□□□□□ -0.25
SPIN3-231	ENST00000639895	SECISBP2L	Q93073	1101 aa	Known RBP	13.46	□□□□□ -0.25
SPIN3-231	ENST00000639895	CHMP4C	Q96CF2	233 aa		13.46	□□□□□ -0.26
SPIN3-231	ENST00000639895	KDM4A	O75164	1064 aa		13.45	□□□□□ -0.26
SPIN3-231	ENST00000639895	NEK11	Q8NG66	645 aa		13.45	□□□□□ -0.26
SPIN3-231	ENST00000639895	MYCBP	Q99417	103 aa	Predicted RBP	13.45	□□□□□ -0.26
SPIN3-231	ENST00000639895	SPATA31E1	Q6ZUB1	1445 aa		13.45	□□□□□ -0.26
SPIN3-231	ENST00000639895	ELF2	Q15723	593 aa		13.45	□□□□□ -0.26
SPIN3-231	ENST00000639895	USP48	Q86UV5	1035 aa		13.45	□□□□□ -0.26
SPIN3-231	ENST00000639895	AFAP1	Q8N556	730 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms