RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 TMEM63CQ9P1W3 806 aa13.26□□□□□ -0.29
SPIN3-230ENST00000639888 IBSPP21815 317 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-230ENST00000639888 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 PAXBP1Q9Y5B6 917 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 EFCAB2Q5VUJ9 269 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
SPIN3-230ENST00000639888 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
SPIN3-230ENST00000639888 MCM2P49736 904 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 ZNF397Q8NF99 534 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-230ENST00000639888 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
SPIN3-230ENST00000639888 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
SPIN3-230ENST00000639888 TCOF1Q13428 1488 aaKnown RBP13.24□□□□□ -0.29
SPIN3-230ENST00000639888 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
SPIN3-230ENST00000639888 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
SPIN3-230ENST00000639888 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
SPIN3-230ENST00000639888 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPIN3-230ENST00000639888 PTGS1P23219 599 aa13.23□□□□□ -0.29
SPIN3-230ENST00000639888 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPIN3-230ENST00000639888 TXLNBQ8N3L3 684 aa13.23□□□□□ -0.29
SPIN3-230ENST00000639888 CHAMP1Q96JM3 812 aa13.23□□□□□ -0.29
SPIN3-230ENST00000639888 DRC1Q96MC2 740 aa13.23□□□□□ -0.29
SPIN3-230ENST00000639888 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
SPIN3-230ENST00000639888 KRBA2Q6ZNG9 492 aa13.23□□□□□ -0.29
SPIN3-230ENST00000639888 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
SPIN3-230ENST00000639888 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 CLGNO14967 610 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 BMP2KLQ5H9B9 411 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 LRRFIP2Q9Y608 721 aaKnown RBP13.22□□□□□ -0.29
SPIN3-230ENST00000639888 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 RNF20Q5VTR2 975 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
SPIN3-230ENST00000639888 MNAT1P51948 309 aa13.21□□□□□ -0.29
SPIN3-230ENST00000639888 CKAP2LQ8IYA6 745 aa13.21□□□□□ -0.29
SPIN3-230ENST00000639888 SAMD9Q5K651 1589 aa13.21□□□□□ -0.29
SPIN3-230ENST00000639888 ERC2O15083 957 aa13.21□□□□□ -0.29
SPIN3-230ENST00000639888 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
SPIN3-230ENST00000639888 BANK1Q8NDB2 785 aa13.21□□□□□ -0.29
SPIN3-230ENST00000639888 NOC3LQ8WTT2 800 aaKnown RBP13.21□□□□□ -0.29
SPIN3-230ENST00000639888 GRIN2AQ12879 1464 aa13.21□□□□□ -0.3
SPIN3-230ENST00000639888 H3BQV1 296 aa13.21□□□□□ -0.3
SPIN3-230ENST00000639888 IFFO2Q5TF58 517 aa13.21□□□□□ -0.3
SPIN3-230ENST00000639888 NUP62CLQ9H1M0 184 aa13.21□□□□□ -0.3
SPIN3-230ENST00000639888 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.3
SPIN3-230ENST00000639888 SMC2O95347 1197 aa13.2□□□□□ -0.3
SPIN3-230ENST00000639888 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
SPIN3-230ENST00000639888 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
SPIN3-230ENST00000639888 URI1O94763 535 aaPredicted RBP13.2□□□□□ -0.3
SPIN3-230ENST00000639888 BRD2P25440 801 aaKnown RBP13.2□□□□□ -0.3
SPIN3-230ENST00000639888 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
SPIN3-230ENST00000639888 KDM4AO75164 1064 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 PKP1Q13835 747 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 MTHFSP49914 203 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 SSH1Q8WYL5 1049 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 TRIM27P14373 513 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-230ENST00000639888 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
SPIN3-230ENST00000639888 NUP153P49790 1475 aaKnown RBP13.18□□□□□ -0.3
SPIN3-230ENST00000639888 USP8P40818 1118 aa13.18□□□□□ -0.3
SPIN3-230ENST00000639888 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
SPIN3-230ENST00000639888 SECISBP2LQ93073 1101 aaKnown RBP13.18□□□□□ -0.3
SPIN3-230ENST00000639888 TDO2P48775 406 aa13.18□□□□□ -0.3
SPIN3-230ENST00000639888 ELF2Q15723 593 aa13.18□□□□□ -0.3
SPIN3-230ENST00000639888 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
SPIN3-230ENST00000639888 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
SPIN3-230ENST00000639888 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
SPIN3-230ENST00000639888 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
SPIN3-230ENST00000639888 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
SPIN3-230ENST00000639888 SPAG9O60271 1321 aaKnown RBP13.17□□□□□ -0.3
SPIN3-230ENST00000639888 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
SPIN3-230ENST00000639888 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
SPIN3-230ENST00000639888 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
SPIN3-230ENST00000639888 TERF2Q15554 542 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
SPIN3-230ENST00000639888 WDR62O43379 1518 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 FOSBP53539 338 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
SPIN3-230ENST00000639888 KANK1Q14678 1352 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
SPIN3-230ENST00000639888 MX1P20591 662 aa13.16□□□□□ -0.3
SPIN3-230ENST00000639888 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-230ENST00000639888 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-230ENST00000639888 KIF3BO15066 747 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 HNRNPH2P55795 449 aaKnown RBP13.15□□□□□ -0.3
SPIN3-230ENST00000639888 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-230ENST00000639888 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 PDILTQ8N807 584 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 API5Q9BZZ5 524 aaKnown RBP13.15□□□□□ -0.3
SPIN3-230ENST00000639888 CENPHQ9H3R5 247 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms