RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ZNF521Q96K83 1311 aa18.3■□□□□ 0.52
ATRIP-208ENST00000639561 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
ATRIP-208ENST00000639561 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
ATRIP-208ENST00000639561 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
ATRIP-208ENST00000639561 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
ATRIP-208ENST00000639561 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
ATRIP-208ENST00000639561 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
ATRIP-208ENST00000639561 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
ATRIP-208ENST00000639561 RRP1P56182 461 aaKnown RBP18.29■□□□□ 0.52
ATRIP-208ENST00000639561 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
ATRIP-208ENST00000639561 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
ATRIP-208ENST00000639561 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
ATRIP-208ENST00000639561 USP6P35125 1406 aa18.28■□□□□ 0.52
ATRIP-208ENST00000639561 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
ATRIP-208ENST00000639561 KIAA0232Q92628 1395 aa18.27■□□□□ 0.52
ATRIP-208ENST00000639561 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
ATRIP-208ENST00000639561 USP19O94966 1318 aa18.26■□□□□ 0.51
ATRIP-208ENST00000639561 NSD2O96028 1365 aa18.26■□□□□ 0.51
ATRIP-208ENST00000639561 NUTM2GQ5VZR2 741 aa18.26■□□□□ 0.51
ATRIP-208ENST00000639561 ONECUT3O60422 494 aaPredicted RBP18.25■□□□□ 0.51
ATRIP-208ENST00000639561 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
ATRIP-208ENST00000639561 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
ATRIP-208ENST00000639561 APAF1O14727 1248 aa18.24■□□□□ 0.51
ATRIP-208ENST00000639561 CPDO75976 1380 aa18.23■□□□□ 0.51
ATRIP-208ENST00000639561 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
ATRIP-208ENST00000639561 MTHFSP49914 203 aa18.23■□□□□ 0.51
ATRIP-208ENST00000639561 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
ATRIP-208ENST00000639561 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
ATRIP-208ENST00000639561 ZC3H6P61129 1189 aaKnown RBP18.22■□□□□ 0.51
ATRIP-208ENST00000639561 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
ATRIP-208ENST00000639561 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
ATRIP-208ENST00000639561 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
ATRIP-208ENST00000639561 SLIT3O75094 1523 aa18.21■□□□□ 0.51
ATRIP-208ENST00000639561 LMO7Q8WWI1 1683 aa18.21■□□□□ 0.51
ATRIP-208ENST00000639561 A0A0G2JS52 829 aa18.21■□□□□ 0.51
ATRIP-208ENST00000639561 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
ATRIP-208ENST00000639561 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
ATRIP-208ENST00000639561 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
ATRIP-208ENST00000639561 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
ATRIP-208ENST00000639561 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
ATRIP-208ENST00000639561 FAM98CQ17RN3 349 aaKnown RBP18.19■□□□□ 0.5
ATRIP-208ENST00000639561 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
ATRIP-208ENST00000639561 GCP02774 474 aa18.19■□□□□ 0.5
ATRIP-208ENST00000639561 NLRP6P59044 892 aa18.19■□□□□ 0.5
ATRIP-208ENST00000639561 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
ATRIP-208ENST00000639561 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
ATRIP-208ENST00000639561 TTC21AQ8NDW8 1320 aa18.18■□□□□ 0.5
ATRIP-208ENST00000639561 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
ATRIP-208ENST00000639561 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
ATRIP-208ENST00000639561 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
ATRIP-208ENST00000639561 EXOC6Q8TAG9 804 aa18.18■□□□□ 0.5
ATRIP-208ENST00000639561 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
ATRIP-208ENST00000639561 FYB1O15117 783 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 TTC21BQ7Z4L5 1316 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 PLIN1O60240 522 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 EVA1CP58658 441 aa18.17■□□□□ 0.5
ATRIP-208ENST00000639561 TRMT2AQ8IZ69 625 aaKnown RBP18.17■□□□□ 0.5
ATRIP-208ENST00000639561 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
ATRIP-208ENST00000639561 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
ATRIP-208ENST00000639561 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
ATRIP-208ENST00000639561 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
ATRIP-208ENST00000639561 USP54Q70EL1 1684 aa18.14■□□□□ 0.5
ATRIP-208ENST00000639561 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
ATRIP-208ENST00000639561 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
ATRIP-208ENST00000639561 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
ATRIP-208ENST00000639561 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
ATRIP-208ENST00000639561 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
ATRIP-208ENST00000639561 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
ATRIP-208ENST00000639561 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
ATRIP-208ENST00000639561 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
ATRIP-208ENST00000639561 BARGINQ6ZT62 677 aa18.11■□□□□ 0.49
ATRIP-208ENST00000639561 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
ATRIP-208ENST00000639561 COL18A1P39060 1754 aa18.11■□□□□ 0.49
ATRIP-208ENST00000639561 E9PSI1 815 aa18.1■□□□□ 0.49
ATRIP-208ENST00000639561 ABCC6O95255 1503 aa18.1■□□□□ 0.49
ATRIP-208ENST00000639561 EP400Q96L91 3159 aa18.1■□□□□ 0.49
ATRIP-208ENST00000639561 ZBTB7CA1YPR0 619 aa18.1■□□□□ 0.49
ATRIP-208ENST00000639561 LARP1Q6PKG0 1096 aaKnown RBP18.1■□□□□ 0.49
ATRIP-208ENST00000639561 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
ATRIP-208ENST00000639561 THRAP3Q9Y2W1 955 aaKnown RBP18.1■□□□□ 0.49
ATRIP-208ENST00000639561 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
ATRIP-208ENST00000639561 EDC4Q6P2E9 1401 aaKnown RBP18.09■□□□□ 0.49
ATRIP-208ENST00000639561 CRB1P82279 1406 aa18.09■□□□□ 0.49
ATRIP-208ENST00000639561 NFAT5O94916 1531 aa18.09■□□□□ 0.49
ATRIP-208ENST00000639561 C20orf194Q5TEA3 1177 aa18.09■□□□□ 0.49
ATRIP-208ENST00000639561 USP31Q70CQ4 1352 aa18.09■□□□□ 0.49
ATRIP-208ENST00000639561 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.49
ATRIP-208ENST00000639561 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
ATRIP-208ENST00000639561 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
ATRIP-208ENST00000639561 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
ATRIP-208ENST00000639561 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
ATRIP-208ENST00000639561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
ATRIP-208ENST00000639561 CRBNQ96SW2 442 aa18.07■□□□□ 0.48
ATRIP-208ENST00000639561 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
ATRIP-208ENST00000639561 WNK3Q9BYP7 1800 aa18.06■□□□□ 0.48
ATRIP-208ENST00000639561 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
ATRIP-208ENST00000639561 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms