RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	ANKRD36B	Q8N2N9	1353 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	RAD21	O60216	631 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	CABP4	P57796	275 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	ANKRD20A12P	Q8NF67	263 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	FBXW7	Q969H0	707 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	MAST1	Q9Y2H9	1570 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	FSD1	Q9BTV5	496 aa		10.34	□□□□□ -0.75
ARHGEF9-238	ENST00000639092	NCBP3	Q53F19	620 aa	Known RBP	10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	CDCA7L	Q96GN5	454 aa		10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	PZP	P20742	1482 aa		10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	VPS37C	A5D8V6	355 aa	Predicted RBP	10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	BICD2	Q8TD16	824 aa		10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	SRCIN1	Q9C0H9	1055 aa		10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	GCC2	Q8IWJ2	1684 aa		10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	SLC4A2	P04920	1241 aa		10.33	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	FANCI	Q9NVI1	1328 aa		10.32	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	SART3	Q15020	963 aa	Known RBP	10.32	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	TTC21B	Q7Z4L5	1316 aa		10.32	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.32	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.32	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	ARAP3	Q8WWN8	1544 aa		10.32	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	MYO5C	Q9NQX4	1742 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	XBP1	P17861	261 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	TTC21A	Q8NDW8	1320 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	MCM2	P49736	904 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	CCDC27	Q2M243	656 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	MAGI2	Q86UL8	1455 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	IPO7	O95373	1038 aa	Known RBP	10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	SLC4A3	P48751	1232 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	ATF7IP	Q6VMQ6	1270 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	CCDC73	Q6ZRK6	1079 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	AMOTL2	Q9Y2J4	779 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	RIMS2	Q9UQ26	1411 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	NFE2L2	Q16236	605 aa		10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	GNL3L	Q9NVN8	582 aa	Known RBP	10.31	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	TSR2	Q969E8	191 aa	Known RBP	10.3	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	BRMS1	Q9HCU9	246 aa		10.3	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	DDX54	Q8TDD1	881 aa	Known RBP	10.3	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.3	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	PDC	P20941	246 aa		10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	CCDC158	Q5M9N0	1113 aa		10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	CCDC43	Q96MW1	224 aa	Known RBP	10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	CNNM1	Q9NRU3	951 aa		10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	NPC1L1	Q9UHC9	1359 aa		10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	SLC3A2	P08195	630 aa	Known RBP	10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	SF3B2	Q13435	895 aa	Known RBP	10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	AMOT	Q4VCS5	1084 aa		10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	NOB1	Q9ULX3	412 aa	Known RBP	10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	PHF8	Q9UPP1	1060 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	RRS1	Q15050	365 aa	Known RBP	10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	GOLGA6L1	Q8N7Z2	621 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	PHF23	Q9BUL5	403 aa	Predicted RBP	10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	IL16	Q14005	1332 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	KLHL34	Q8N239	644 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	PDZRN3	Q9UPQ7	1066 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	ASXL1	Q8IXJ9	1541 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	FAM177B	A6PVY3	158 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	MBD5	Q9P267	1494 aa		10.28	□□□□□ -0.76
ARHGEF9-238	ENST00000639092	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	NUTM2E	B1AL46	878 aa	Predicted RBP	10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	SLFN5	Q08AF3	891 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	GSE1	Q14687	1217 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	RABEP1	Q15276	862 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	DNAJC2	Q99543	621 aa	Known RBP	10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	ALDH1L2	Q3SY69	923 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	LRRCC1	Q9C099	1032 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	MLH3	Q9UHC1	1453 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	TMPO	P42166	694 aa	Known RBP	10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	MAGI3	Q5TCQ9	1506 aa		10.27	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	ZC3H6	P61129	1189 aa	Known RBP	10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	MVP	Q14764	893 aa	Known RBP	10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	IFT57	Q9NWB7	429 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	TBX22	Q9Y458	520 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	GNAT3	A8MTJ3	354 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	CCDC57	Q2TAC2	916 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	SASS6	Q6UVJ0	657 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	CADPS2	Q86UW7	1296 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	SIRT1	Q96EB6	747 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	BTBD11	A6QL63	1104 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	FYB1	O15117	783 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	MPHOSPH8	Q99549	860 aa		10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	CWC22	Q9HCG8	908 aa	Known RBP	10.26	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	ZMYM3	Q14202	1370 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	WAPL	Q7Z5K2	1190 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	INSR	P06213	1382 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092		A0A0U1RQG5	324 aa	Predicted RBP	10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	C11orf95	C9JLR9	678 aa	Predicted RBP	10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	BCAR3	O75815	825 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	TTC39A	Q5SRH9	613 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	NACAP1	Q9BZK3	213 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	CEP126	Q9P2H0	1117 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	KDM5D	Q9BY66	1539 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	NEK4	P51957	841 aa		10.25	□□□□□ -0.77
ARHGEF9-238	ENST00000639092	ZSCAN25	Q6NSZ9	544 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms