RNA–Protein interactions for RNA: ENST00000638921.1

GFAP-230, Transcript of glial fibrillary acidic protein, humanhuman

Gene GFAP, Length 2,617 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-230ENST00000638921 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
GFAP-230ENST00000638921 IFT57Q9NWB7 429 aa18.05■□□□□ 0.48
GFAP-230ENST00000638921 A2ML1A8K2U0 1454 aa18.05■□□□□ 0.48
GFAP-230ENST00000638921 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
GFAP-230ENST00000638921 IL13P35225 146 aa18.04■□□□□ 0.48
GFAP-230ENST00000638921 PIK3R4Q99570 1358 aa18.04■□□□□ 0.48
GFAP-230ENST00000638921 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
GFAP-230ENST00000638921 EDC4Q6P2E9 1401 aaKnown RBP18.04■□□□□ 0.48
GFAP-230ENST00000638921 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
GFAP-230ENST00000638921 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
GFAP-230ENST00000638921 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
GFAP-230ENST00000638921 GCC1Q96CN9 775 aa18.03■□□□□ 0.48
GFAP-230ENST00000638921 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
GFAP-230ENST00000638921 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
GFAP-230ENST00000638921 ZNF853P0CG23 659 aa18.03■□□□□ 0.48
GFAP-230ENST00000638921 HSCBQ8IWL3 235 aa18.03■□□□□ 0.48
GFAP-230ENST00000638921 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
GFAP-230ENST00000638921 MCM4P33991 863 aa18.02■□□□□ 0.48
GFAP-230ENST00000638921 BMP2KLQ5H9B9 411 aa18.02■□□□□ 0.48
GFAP-230ENST00000638921 TSPOAP1O95153 1857 aa18.02■□□□□ 0.48
GFAP-230ENST00000638921 TSPYL6Q8N831 410 aa18.02■□□□□ 0.48
GFAP-230ENST00000638921 AATKQ6ZMQ8 1374 aa18.02■□□□□ 0.47
GFAP-230ENST00000638921 MAP2P11137 1827 aaKnown RBP18.01■□□□□ 0.47
GFAP-230ENST00000638921 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
GFAP-230ENST00000638921 NME9Q86XW9 330 aa18.01■□□□□ 0.47
GFAP-230ENST00000638921 MBIPQ9NS73 344 aa18.01■□□□□ 0.47
GFAP-230ENST00000638921 AGLP35573 1532 aa18.01■□□□□ 0.47
GFAP-230ENST00000638921 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
GFAP-230ENST00000638921 ANKRD45Q5TZF3 282 aa18■□□□□ 0.47
GFAP-230ENST00000638921 PLEKHG5O94827 1062 aa18■□□□□ 0.47
GFAP-230ENST00000638921 SNX21Q969T3 373 aa18■□□□□ 0.47
GFAP-230ENST00000638921 ABCC4O15439 1325 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 SETD1AO15047 1707 aaKnown RBP17.99■□□□□ 0.47
GFAP-230ENST00000638921 SPATA31D1Q6ZQQ2 1576 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 REREQ9P2R6 1566 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
GFAP-230ENST00000638921 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
GFAP-230ENST00000638921 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
GFAP-230ENST00000638921 COG3Q96JB2 828 aa17.98■□□□□ 0.47
GFAP-230ENST00000638921 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
GFAP-230ENST00000638921 ZRANB1Q9UGI0 708 aa17.98■□□□□ 0.47
GFAP-230ENST00000638921 XRCC6P12956 609 aaKnown RBP eCLIP17.97■□□□□ 0.47
GFAP-230ENST00000638921 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
GFAP-230ENST00000638921 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
GFAP-230ENST00000638921 NCOA3Q9Y6Q9 1424 aa17.97■□□□□ 0.47
GFAP-230ENST00000638921 FSD2A1L4K1 749 aa17.96■□□□□ 0.47
GFAP-230ENST00000638921 SIRT2Q8IXJ6 389 aa17.96■□□□□ 0.47
GFAP-230ENST00000638921 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
GFAP-230ENST00000638921 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
GFAP-230ENST00000638921 CCDC61Q9Y6R9 512 aa17.96■□□□□ 0.47
GFAP-230ENST00000638921 METP08581 1390 aa17.95■□□□□ 0.46
GFAP-230ENST00000638921 DDIT3P35638 169 aa17.95■□□□□ 0.46
GFAP-230ENST00000638921 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
GFAP-230ENST00000638921 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
GFAP-230ENST00000638921 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
GFAP-230ENST00000638921 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
GFAP-230ENST00000638921 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
GFAP-230ENST00000638921 GOLGA6L3A6NEY3 463 aa17.94■□□□□ 0.46
GFAP-230ENST00000638921 TRAK2O60296 914 aa17.93■□□□□ 0.46
GFAP-230ENST00000638921 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
GFAP-230ENST00000638921 CPS1P31327 1500 aa17.92■□□□□ 0.46
GFAP-230ENST00000638921 NRXN3Q9Y4C0 1643 aa17.92■□□□□ 0.46
GFAP-230ENST00000638921 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
GFAP-230ENST00000638921 DDX11L8A8MPP1 907 aa17.92■□□□□ 0.46
GFAP-230ENST00000638921 TBC1D9Q6ZT07 1266 aa17.92■□□□□ 0.46
GFAP-230ENST00000638921 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
GFAP-230ENST00000638921 KIF2CQ99661 725 aa17.91■□□□□ 0.46
GFAP-230ENST00000638921 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
GFAP-230ENST00000638921 TECPR2O15040 1411 aa17.9■□□□□ 0.46
GFAP-230ENST00000638921 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
GFAP-230ENST00000638921 DCTN1Q14203 1278 aa17.89■□□□□ 0.46
GFAP-230ENST00000638921 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.46
GFAP-230ENST00000638921 MON2Q7Z3U7 1717 aa17.89■□□□□ 0.45
GFAP-230ENST00000638921 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
GFAP-230ENST00000638921 PDCL3Q9H2J4 239 aa17.89■□□□□ 0.45
GFAP-230ENST00000638921 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
GFAP-230ENST00000638921 PANK2Q9BZ23 570 aa17.88■□□□□ 0.45
GFAP-230ENST00000638921 DLG5Q8TDM6 1919 aa17.88■□□□□ 0.45
GFAP-230ENST00000638921 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
GFAP-230ENST00000638921 CDC45O75419 566 aa17.87■□□□□ 0.45
GFAP-230ENST00000638921 DCTPP1Q9H773 170 aa17.87■□□□□ 0.45
GFAP-230ENST00000638921 TPM2P07951 284 aa17.87■□□□□ 0.45
GFAP-230ENST00000638921 INTS3Q68E01 1043 aaKnown RBP17.87■□□□□ 0.45
GFAP-230ENST00000638921 C3P01024 1663 aa17.87■□□□□ 0.45
GFAP-230ENST00000638921 TNPO1Q92973 898 aaKnown RBP17.86■□□□□ 0.45
GFAP-230ENST00000638921 PRR36Q9H6K5 1346 aa17.86■□□□□ 0.45
GFAP-230ENST00000638921 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
GFAP-230ENST00000638921 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
GFAP-230ENST00000638921 PLEKHM2Q8IWE5 1019 aa17.85■□□□□ 0.45
GFAP-230ENST00000638921 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
GFAP-230ENST00000638921 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
GFAP-230ENST00000638921 K7ELQ4 463 aaPredicted RBP17.85■□□□□ 0.45
GFAP-230ENST00000638921 AEBP1Q8IUX7 1158 aa17.85■□□□□ 0.45
GFAP-230ENST00000638921 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
GFAP-230ENST00000638921 ESPNB1AK53 854 aa17.84■□□□□ 0.45
GFAP-230ENST00000638921 CHL1O00533 1208 aa17.84■□□□□ 0.45
GFAP-230ENST00000638921 CD2BP2O95400 341 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms