RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
RTTN-213ENST00000638799 EIF4A2Q14240 407 aaKnown RBP9.56□□□□□ -0.88
RTTN-213ENST00000638799 NEFMP07197 916 aa9.56□□□□□ -0.88
RTTN-213ENST00000638799 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
RTTN-213ENST00000638799 ADGRL3Q9HAR2 1447 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 FANCIQ9NVI1 1328 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 BCL2L13Q9BXK5 485 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
RTTN-213ENST00000638799 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
RTTN-213ENST00000638799 NLRP6P59044 892 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 C14orf37Q86TY3 774 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 MYH16Q9H6N6 1097 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 MAP3K19Q56UN5 1328 aa9.55□□□□□ -0.88
RTTN-213ENST00000638799 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
RTTN-213ENST00000638799 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
RTTN-213ENST00000638799 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
RTTN-213ENST00000638799 HSPA2P54652 639 aa9.54□□□□□ -0.88
RTTN-213ENST00000638799 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
RTTN-213ENST00000638799 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.54□□□□□ -0.88
RTTN-213ENST00000638799 MARF1Q9Y4F3 1742 aaKnown RBP9.54□□□□□ -0.88
RTTN-213ENST00000638799 EXOSC9Q06265 439 aaKnown RBP9.53□□□□□ -0.88
RTTN-213ENST00000638799 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
RTTN-213ENST00000638799 SULT6B1Q6IMI4 303 aa9.53□□□□□ -0.88
RTTN-213ENST00000638799 ABTB2Q8N961 1025 aa9.53□□□□□ -0.88
RTTN-213ENST00000638799 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
RTTN-213ENST00000638799 TNNQ9UQP3 1299 aa9.53□□□□□ -0.88
RTTN-213ENST00000638799 FRAT1Q92837 279 aaPredicted RBP9.53□□□□□ -0.88
RTTN-213ENST00000638799 PROSER2Q86WR7 435 aaPredicted RBP9.52□□□□□ -0.89
RTTN-213ENST00000638799 PANK1Q8TE04 598 aa9.52□□□□□ -0.89
RTTN-213ENST00000638799 NWD1Q149M9 1564 aa9.52□□□□□ -0.89
RTTN-213ENST00000638799 FAM83GA6ND36 823 aa9.52□□□□□ -0.89
RTTN-213ENST00000638799 XPCQ01831 940 aaPredicted RBP9.51□□□□□ -0.89
RTTN-213ENST00000638799 GLIPR1L2Q4G1C9 344 aa9.51□□□□□ -0.89
RTTN-213ENST00000638799 DLG5Q8TDM6 1919 aa9.51□□□□□ -0.89
RTTN-213ENST00000638799 IL16Q14005 1332 aa9.51□□□□□ -0.89
RTTN-213ENST00000638799 SKAP1Q86WV1 359 aa9.51□□□□□ -0.89
RTTN-213ENST00000638799 RGPD1P0DJD0 1748 aa9.51□□□□□ -0.89
RTTN-213ENST00000638799 CANXP27824 592 aaKnown RBP9.5□□□□□ -0.89
RTTN-213ENST00000638799 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 SBNO1A3KN83 1393 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 AMPHP49418 695 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 PSME1Q06323 249 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 FLT4P35916 1363 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 FOXO3O43524 673 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 RLBP1P12271 317 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 KDM4FA0A1W2PPD8 638 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
RTTN-213ENST00000638799 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
RTTN-213ENST00000638799 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
RTTN-213ENST00000638799 SSH1Q8WYL5 1049 aa9.49□□□□□ -0.89
RTTN-213ENST00000638799 CLUAP1Q96AJ1 413 aa9.49□□□□□ -0.89
RTTN-213ENST00000638799 HOXC9P31274 260 aa9.48□□□□□ -0.89
RTTN-213ENST00000638799 EYA1Q99502 592 aa9.48□□□□□ -0.89
RTTN-213ENST00000638799 USP54Q70EL1 1684 aa9.48□□□□□ -0.89
RTTN-213ENST00000638799 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
RTTN-213ENST00000638799 C19orf44Q9H6X5 657 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 MBIPQ9NS73 344 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 SMC4Q9NTJ3 1288 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 ZNF853P0CG23 659 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 ARHGEF10O15013 1369 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 CT47B1P0C2W7 299 aaPredicted RBP9.47□□□□□ -0.89
RTTN-213ENST00000638799 MCM10Q7L590 875 aa9.47□□□□□ -0.89
RTTN-213ENST00000638799 C1orf167Q5SNV9 1468 aa9.46□□□□□ -0.9
RTTN-213ENST00000638799 ELL2O00472 640 aaPredicted RBP9.46□□□□□ -0.9
RTTN-213ENST00000638799 DDX17Q92841 729 aaKnown RBP9.46□□□□□ -0.9
RTTN-213ENST00000638799 IFT57Q9NWB7 429 aa9.46□□□□□ -0.9
RTTN-213ENST00000638799 IGSF1Q8N6C5 1336 aa9.46□□□□□ -0.9
RTTN-213ENST00000638799 LTN1O94822 1766 aa9.46□□□□□ -0.9
RTTN-213ENST00000638799 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
RTTN-213ENST00000638799 MTHFSDQ2M296 383 aaKnown RBP9.46□□□□□ -0.9
RTTN-213ENST00000638799 NFAT5O94916 1531 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 GNAI1P63096 354 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 LMOD2Q6P5Q4 547 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 KDRP35968 1356 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 NOB1Q9ULX3 412 aaKnown RBP9.45□□□□□ -0.9
RTTN-213ENST00000638799 LMOD3Q0VAK6 560 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
RTTN-213ENST00000638799 TCERG1O14776 1098 aaKnown RBP9.44□□□□□ -0.9
RTTN-213ENST00000638799 IGHDP01880 384 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 TRIM27P14373 513 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 ZKSCAN2Q63HK3 967 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 C8orf58Q8NAV2 365 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 LMTK3Q96Q04 1460 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 VAMP4O75379 141 aa9.44□□□□□ -0.9
RTTN-213ENST00000638799 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
RTTN-213ENST00000638799 MST1RQ04912 1400 aa9.43□□□□□ -0.9
RTTN-213ENST00000638799 KIF24Q5T7B8 1368 aa9.43□□□□□ -0.9
RTTN-213ENST00000638799 ATF3P18847 181 aa9.43□□□□□ -0.9
RTTN-213ENST00000638799 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
RTTN-213ENST00000638799 CENPQQ7L2Z9 268 aaPredicted RBP9.43□□□□□ -0.9
RTTN-213ENST00000638799 DZIP1LQ8IYY4 767 aaKnown RBP9.43□□□□□ -0.9
RTTN-213ENST00000638799 IP6K1Q92551 441 aa9.43□□□□□ -0.9
RTTN-213ENST00000638799 TRPM3Q9HCF6 1732 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms