RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 BACH2Q9BYV9 841 aa13.32□□□□□ -0.28
PAX6-236ENST00000638685 MAP3K19Q56UN5 1328 aa13.32□□□□□ -0.28
PAX6-236ENST00000638685 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
PAX6-236ENST00000638685 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
PAX6-236ENST00000638685 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
PAX6-236ENST00000638685 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
PAX6-236ENST00000638685 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
PAX6-236ENST00000638685 NLRP6P59044 892 aa13.31□□□□□ -0.28
PAX6-236ENST00000638685 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
PAX6-236ENST00000638685 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
PAX6-236ENST00000638685 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
PAX6-236ENST00000638685 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
PAX6-236ENST00000638685 ORAI2Q96SN7 254 aa13.3□□□□□ -0.28
PAX6-236ENST00000638685 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
PAX6-236ENST00000638685 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
PAX6-236ENST00000638685 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
PAX6-236ENST00000638685 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
PAX6-236ENST00000638685 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
PAX6-236ENST00000638685 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
PAX6-236ENST00000638685 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
PAX6-236ENST00000638685 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 ABTB2Q8N961 1025 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
PAX6-236ENST00000638685 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
PAX6-236ENST00000638685 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
PAX6-236ENST00000638685 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
PAX6-236ENST00000638685 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
PAX6-236ENST00000638685 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.29
PAX6-236ENST00000638685 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.29
PAX6-236ENST00000638685 AAMPQ13685 434 aa13.26□□□□□ -0.29
PAX6-236ENST00000638685 USP54Q70EL1 1684 aa13.26□□□□□ -0.29
PAX6-236ENST00000638685 FOXO3O43524 673 aa13.25□□□□□ -0.29
PAX6-236ENST00000638685 RLBP1P12271 317 aa13.25□□□□□ -0.29
PAX6-236ENST00000638685 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
PAX6-236ENST00000638685 FLT4P35916 1363 aa13.25□□□□□ -0.29
PAX6-236ENST00000638685 IL16Q14005 1332 aa13.25□□□□□ -0.29
PAX6-236ENST00000638685 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
PAX6-236ENST00000638685 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
PAX6-236ENST00000638685 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
PAX6-236ENST00000638685 LTN1O94822 1766 aa13.24□□□□□ -0.29
PAX6-236ENST00000638685 AMPHP49418 695 aa13.23□□□□□ -0.29
PAX6-236ENST00000638685 PSME1Q06323 249 aa13.23□□□□□ -0.29
PAX6-236ENST00000638685 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
PAX6-236ENST00000638685 NEFMP07197 916 aa13.23□□□□□ -0.29
PAX6-236ENST00000638685 HOXC9P31274 260 aa13.23□□□□□ -0.29
PAX6-236ENST00000638685 EYA1Q99502 592 aa13.23□□□□□ -0.29
PAX6-236ENST00000638685 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
PAX6-236ENST00000638685 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
PAX6-236ENST00000638685 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
PAX6-236ENST00000638685 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
PAX6-236ENST00000638685 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
PAX6-236ENST00000638685 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
PAX6-236ENST00000638685 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
PAX6-236ENST00000638685 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.29
PAX6-236ENST00000638685 NFAT5O94916 1531 aa13.21□□□□□ -0.29
PAX6-236ENST00000638685 STRCQ7RTU9 1775 aa13.21□□□□□ -0.3
PAX6-236ENST00000638685 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.3
PAX6-236ENST00000638685 ZNF853P0CG23 659 aa13.21□□□□□ -0.3
PAX6-236ENST00000638685 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.3
PAX6-236ENST00000638685 MBIPQ9NS73 344 aa13.21□□□□□ -0.3
PAX6-236ENST00000638685 FAM161AQ3B820 660 aa13.2□□□□□ -0.3
PAX6-236ENST00000638685 MCM10Q7L590 875 aa13.2□□□□□ -0.3
PAX6-236ENST00000638685 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
PAX6-236ENST00000638685 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
PAX6-236ENST00000638685 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
PAX6-236ENST00000638685 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
PAX6-236ENST00000638685 XIRP1Q702N8 1843 aaKnown RBP13.19□□□□□ -0.3
PAX6-236ENST00000638685 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
PAX6-236ENST00000638685 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
PAX6-236ENST00000638685 KDRP35968 1356 aa13.19□□□□□ -0.3
PAX6-236ENST00000638685 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
PAX6-236ENST00000638685 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
PAX6-236ENST00000638685 SMC4Q9NTJ3 1288 aa13.18□□□□□ -0.3
PAX6-236ENST00000638685 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
PAX6-236ENST00000638685 MST1RQ04912 1400 aa13.18□□□□□ -0.3
PAX6-236ENST00000638685 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
PAX6-236ENST00000638685 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
PAX6-236ENST00000638685 IGHDP01880 384 aa13.17□□□□□ -0.3
PAX6-236ENST00000638685 TRIM27P14373 513 aa13.17□□□□□ -0.3
PAX6-236ENST00000638685 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
PAX6-236ENST00000638685 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
PAX6-236ENST00000638685 VAMP4O75379 141 aa13.16□□□□□ -0.3
PAX6-236ENST00000638685 KRT28Q7Z3Y7 464 aa13.16□□□□□ -0.3
PAX6-236ENST00000638685 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
PAX6-236ENST00000638685 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
PAX6-236ENST00000638685 GNAI1P63096 354 aa13.16□□□□□ -0.3
PAX6-236ENST00000638685 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
PAX6-236ENST00000638685 GCP02774 474 aa13.15□□□□□ -0.3
PAX6-236ENST00000638685 ZKSCAN2Q63HK3 967 aa13.15□□□□□ -0.3
PAX6-236ENST00000638685 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 IP6K1Q92551 441 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 ATF3P18847 181 aa13.14□□□□□ -0.31
PAX6-236ENST00000638685 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms