RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 LNPKQ9C0E8 428 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 SLFN5Q08AF3 891 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 MPRIPQ6WCQ1 1025 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 GNAI2P04899 355 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 CHRNA2Q15822 529 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 LRRFIP1Q32MZ4 808 aaKnown RBP5.36□□□□□ -1.55
SCN3A-208ENST00000638473 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
SCN3A-208ENST00000638473 ST18O60284 1047 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 PTMAP06454 111 aaKnown RBP5.36□□□□□ -1.55
SCN3A-208ENST00000638473 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 ZRANB1Q9UGI0 708 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 NGLY1Q96IV0 654 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 MLH3Q9UHC1 1453 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 PDE4AP27815 886 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 CCT4P50991 539 aaKnown RBP5.36□□□□□ -1.55
SCN3A-208ENST00000638473 RUFY2Q8WXA3 655 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 AMOTL1Q8IY63 956 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 TRIM34Q9BYJ4 488 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 ANO2Q9NQ90 1003 aa5.36□□□□□ -1.55
SCN3A-208ENST00000638473 APPP05067 770 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 GNAI3P08754 354 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 EFCAB6Q5THR3 1501 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 MAGI2Q86UL8 1455 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 ERC2O15083 957 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 CT47B1P0C2W7 299 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-208ENST00000638473 LMTK3Q96Q04 1460 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 KCNA6P17658 529 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 TAF7Q15545 349 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-208ENST00000638473 UBAP1LF5GYI3 381 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 FYB1O15117 783 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 DUSP27Q5VZP5 1158 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 AAMPQ13685 434 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 TSHZ2Q9NRE2 1034 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 A0A1W2PP64 1363 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 NKTRP30414 1462 aaKnown RBP5.35□□□□□ -1.55
SCN3A-208ENST00000638473 NPHP3Q7Z494 1330 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 COL17A1Q9UMD9 1497 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-208ENST00000638473 TOM1O60784 492 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 CCDC27Q2M243 656 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 CNNM1Q9NRU3 951 aa5.35□□□□□ -1.55
SCN3A-208ENST00000638473 CAMSAP1Q5T5Y3 1602 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 TTC39AQ5SRH9 613 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 FOXD4L5Q5VV16 416 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-208ENST00000638473 FOXD4L4Q8WXT5 416 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-208ENST00000638473 STARD3NLO95772 234 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 CABLES1Q8TDN4 633 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 SURF6O75683 361 aaKnown RBP5.34□□□□□ -1.55
SCN3A-208ENST00000638473 INTS3Q68E01 1043 aaKnown RBP5.34□□□□□ -1.55
SCN3A-208ENST00000638473 GBP4Q96PP9 640 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 SIL1Q9H173 461 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 CLTCL1P53675 1640 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 UNC13BO14795 1591 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 ATF7IPQ6VMQ6 1270 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 BICDL1Q6ZP65 573 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 CNTROBQ8N137 903 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 EXOC5O00471 708 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 PTCD1O75127 700 aaKnown RBP5.34□□□□□ -1.55
SCN3A-208ENST00000638473 DNAJC2Q99543 621 aaKnown RBP5.34□□□□□ -1.55
SCN3A-208ENST00000638473 C19orf44Q9H6X5 657 aa5.34□□□□□ -1.55
SCN3A-208ENST00000638473 PDE3AQ14432 1141 aa5.34□□□□□ -1.56
SCN3A-208ENST00000638473 MVPQ14764 893 aaKnown RBP5.34□□□□□ -1.56
SCN3A-208ENST00000638473 IPO9Q96P70 1041 aaKnown RBP5.34□□□□□ -1.56
SCN3A-208ENST00000638473 PPP1R1BQ9UD71 204 aaPredicted RBP5.34□□□□□ -1.56
SCN3A-208ENST00000638473 ABCC3O15438 1527 aa5.34□□□□□ -1.56
SCN3A-208ENST00000638473 KDM5CP41229 1560 aa5.34□□□□□ -1.56
SCN3A-208ENST00000638473 TMEM2Q9UHN6 1383 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 RAD21O60216 631 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 SRCIN1Q9C0H9 1055 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 TBX22Q9Y458 520 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 FANCIQ9NVI1 1328 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 ERVK-7P63135 1459 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 ARAP3Q8WWN8 1544 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 FAM83GA6ND36 823 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 MAP4K4O95819 1239 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-208ENST00000638473 PTMSP20962 102 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 ERC1Q8IUD2 1116 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 ABCC11Q96J66 1382 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 WASHC4Q2M389 1173 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 MYD88Q99836 296 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 C8orf37Q96NL8 207 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 TESK2Q96S53 571 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 GOLGA6L6A8MZA4 724 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 H3BQV1 296 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 IFFO2Q5TF58 517 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 GCC1Q96CN9 775 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 PDZRN3Q9UPQ7 1066 aa5.33□□□□□ -1.56
SCN3A-208ENST00000638473 E9PCH4 1651 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 REC8O95072 547 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 HTATSF1O43719 755 aaKnown RBP5.32□□□□□ -1.56
SCN3A-208ENST00000638473 SYNE3Q6ZMZ3 975 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 IFNL2Q8IZJ0 200 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 TMEM57Q8N5G2 664 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 CARD14Q9BXL6 1004 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 CLSTN1O94985 981 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 FAM184AQ8NB25 1140 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 LRRC59Q96AG4 307 aaKnown RBP5.32□□□□□ -1.56
SCN3A-208ENST00000638473 EIF4A2Q14240 407 aaKnown RBP5.32□□□□□ -1.56
SCN3A-208ENST00000638473 CCDC57Q2TAC2 916 aa5.32□□□□□ -1.56
SCN3A-208ENST00000638473 LRRCC1Q9C099 1032 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms