RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
CACNA1A-254ENST00000637952 SPG7Q9UQ90 795 aa11.15□□□□□ -0.62
CACNA1A-254ENST00000637952 KDM5AP29375 1690 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-254ENST00000637952 HOXC9P31274 260 aa11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 USP21Q9UK80 565 aa11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 TCP11L2Q8N4U5 519 aa11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 EXOC5O00471 708 aa11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 ATP7BP35670 1465 aa11.14□□□□□ -0.63
CACNA1A-254ENST00000637952 EIF4A2Q14240 407 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-254ENST00000637952 KIAA1210Q9ULL0 1709 aa11.13□□□□□ -0.63
CACNA1A-254ENST00000637952 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
CACNA1A-254ENST00000637952 FLT4P35916 1363 aa11.13□□□□□ -0.63
CACNA1A-254ENST00000637952 FCHSD2O94868 740 aa11.13□□□□□ -0.63
CACNA1A-254ENST00000637952 KIAA0232Q92628 1395 aa11.13□□□□□ -0.63
CACNA1A-254ENST00000637952 PNISRQ8TF01 805 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-254ENST00000637952 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-254ENST00000637952 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
CACNA1A-254ENST00000637952 MST1RQ04912 1400 aa11.11□□□□□ -0.63
CACNA1A-254ENST00000637952 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
CACNA1A-254ENST00000637952 DCCP43146 1447 aa11.11□□□□□ -0.63
CACNA1A-254ENST00000637952 ARHGEF25Q86VW2 580 aa11.11□□□□□ -0.63
CACNA1A-254ENST00000637952 EYA1Q99502 592 aa11.1□□□□□ -0.63
CACNA1A-254ENST00000637952 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
CACNA1A-254ENST00000637952 ZNF142P52746 1687 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-254ENST00000637952 JCADQ9P266 1359 aa11.1□□□□□ -0.63
CACNA1A-254ENST00000637952 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
CACNA1A-254ENST00000637952 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 POLR3AO14802 1390 aaPredicted RBP11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 DDB1Q16531 1140 aa11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 FAM98CQ17RN3 349 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-254ENST00000637952 PARD3Q8TEW0 1356 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 IL2RBP14784 551 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 CABP4P57796 275 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 SF3B2Q13435 895 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 FBXO41Q8TF61 875 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 FRAT1Q92837 279 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 MSH5O43196 834 aa11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 POLR1AO95602 1720 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-254ENST00000637952 HSP90AB1P08238 724 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 TSPYL4Q9UJ04 414 aa11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 NBPF6Q5VWK0 638 aa11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 NBPF4Q96M43 638 aa11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 NPHP1O15259 732 aa11.07□□□□□ -0.64
CACNA1A-254ENST00000637952 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 EIF2S2P20042 333 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 TRPC5Q9UL62 973 aaPredicted RBP11.06□□□□□ -0.64
CACNA1A-254ENST00000637952 IFT172Q9UG01 1749 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 MCM10Q7L590 875 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 THUMPD2Q9BTF0 503 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 NRXN3Q9Y4C0 1643 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 IL13P35225 146 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
CACNA1A-254ENST00000637952 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 AFF2P51816 1311 aa11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 GNAI1P63096 354 aa11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 ZNF772Q68DY9 489 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
CACNA1A-254ENST00000637952 ACSBG1Q96GR2 724 aa11.03□□□□□ -0.64
CACNA1A-254ENST00000637952 CHMP4AQ9BY43 222 aa11.03□□□□□ -0.64
CACNA1A-254ENST00000637952 TCERG1O14776 1098 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-254ENST00000637952 E9PSI1 815 aa11.02□□□□□ -0.64
CACNA1A-254ENST00000637952 TMOD3Q9NYL9 352 aa11.02□□□□□ -0.64
CACNA1A-254ENST00000637952 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.64
CACNA1A-254ENST00000637952 ZBTB47Q9UFB7 747 aaPredicted RBP11.02□□□□□ -0.64
CACNA1A-254ENST00000637952 INSRP06213 1382 aa11.02□□□□□ -0.65
CACNA1A-254ENST00000637952 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.65
CACNA1A-254ENST00000637952 FTSJ3Q8IY81 847 aaKnown RBP11.02□□□□□ -0.65
CACNA1A-254ENST00000637952 CDC42BPGQ6DT37 1551 aa11.02□□□□□ -0.65
CACNA1A-254ENST00000637952 AATKQ6ZMQ8 1374 aa11.01□□□□□ -0.65
CACNA1A-254ENST00000637952 RXRBP28702 533 aa11.01□□□□□ -0.65
CACNA1A-254ENST00000637952 IRX6P78412 446 aaPredicted RBP11.01□□□□□ -0.65
CACNA1A-254ENST00000637952 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
CACNA1A-254ENST00000637952 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.01□□□□□ -0.65
CACNA1A-254ENST00000637952 ERBB3P21860 1342 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms